Detailed information NTG0234867

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: S101395_RS02485
• Genome accession: NZ_CP021920
• Coordinates: 470691..471263 (+)
• Length: 190 a.a.
• NCBI ID: WP_006639372.1
• Uniprot ID: M5P203
• Organism: Bacillus sonorensis strain SRCM101395
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 465691..476263

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S101395_RS02460 (S101395_00494)	cls	466177..467625 (-)	1449	WP_029419622.1	cardiolipin synthase	-
S101395_RS02465 (S101395_00495)	-	467876..468319 (+)	444	WP_006639376.1	YwnF family protein	-
S101395_RS02470 (S101395_00496)	-	468355..468861 (-)	507	WP_029419621.1	GNAT family N-acetyltransferase	-
S101395_RS02475 (S101395_00497)	-	469064..469936 (+)	873	WP_006639374.1	M23 family metallopeptidase	-
S101395_RS02480 (S101395_00498)	-	470069..470677 (+)	609	WP_006639373.1	sigma-70 family RNA polymerase sigma factor	-
S101395_RS02485 (S101395_00499)	clpP	470691..471263 (+)	573	WP_006639372.1	ATP-dependent Clp protease proteolytic subunit	Regulator
S101395_RS26885	-	471721..472115 (-)	395	Protein_465	hypothetical protein	-
S101395_RS02495 (S101395_00500)	-	472474..472824 (-)	351	WP_006639371.1	P-II family nitrogen regulator	-
S101395_RS02500 (S101395_00501)	-	472843..474054 (-)	1212	WP_006639370.1	ammonium transporter	-
S101395_RS02505 (S101395_00502)	-	474211..475509 (-)	1299	WP_006639369.1	hemolysin family protein	-

Sequence

Protein

• Length: 190 a.a.
• Molecular weight: 21147.37 Da
• Isoelectric Point: 5.3555

>NTDB_id=234867 S101395_RS02485 WP_006639372.1 470691..471263(+) (clpP) [Bacillus sonorensis strain SRCM101395]
MNTIPYVIEKTAAGERSYDIFSRLLKDRIIMIGSEFTDDLANRVTAQLLFLSAEDDEKDISIYINSPGGSTSAGYAILDT
MEYVKPDIRTICVGMAASMGAILLAGGTKGKRYALKNSEIMIHQPLGGVKGQATDMEISARRIIKLKEKIQHFFHERTGQ
PLEKLKIDMERDYFMDAGEAKTYGIVDDIL

Nucleotide

• Length: 573 bp

>NTDB_id=234867 S101395_RS02485 WP_006639372.1 470691..471263(+) (clpP) [Bacillus sonorensis strain SRCM101395]
ATGAACACCATTCCGTATGTCATAGAAAAAACAGCGGCGGGAGAAAGGTCTTACGACATTTTTTCAAGGCTCTTGAAAGA
CCGCATCATTATGATCGGCTCGGAATTTACGGACGATCTGGCCAATCGGGTTACCGCCCAATTGCTGTTTTTGTCAGCGG
AGGATGACGAAAAGGATATTTCGATTTATATCAACAGCCCCGGCGGTTCTACGTCAGCCGGATATGCGATTTTAGATACG
ATGGAATATGTGAAACCGGATATCCGCACGATCTGCGTCGGGATGGCGGCGTCAATGGGGGCGATCCTTCTTGCGGGCGG
AACAAAAGGAAAACGGTATGCTCTCAAAAACAGCGAAATCATGATCCATCAGCCGCTCGGCGGCGTCAAAGGCCAGGCGA
CAGACATGGAGATTTCCGCGAGGCGGATCATCAAGCTAAAGGAAAAAATACAGCACTTTTTCCATGAACGGACGGGGCAG
CCGCTTGAAAAACTAAAAATAGACATGGAACGCGACTATTTTATGGATGCCGGGGAAGCGAAGACATACGGCATCGTTGA
TGACATTTTGTGA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-190)

3D structure

• AlphaFold DB: M5P203

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	64.211	100	0.642
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.428	98.421	0.595
clpP	Streptococcus thermophilus LMG 18311	53.439	99.474	0.532
clpP	Streptococcus thermophilus LMD-9	53.439	99.474	0.532
clpP	Streptococcus pneumoniae D39	52.91	99.474	0.526
clpP	Streptococcus pneumoniae Rx1	52.91	99.474	0.526
clpP	Streptococcus pneumoniae R6	52.91	99.474	0.526
clpP	Streptococcus pneumoniae TIGR4	52.91	99.474	0.526
clpP	Streptococcus mutans UA159	51.852	99.474	0.516
clpP	Streptococcus pyogenes JRS4	51.852	99.474	0.516
clpP	Streptococcus pyogenes MGAS315	51.852	99.474	0.516
clpP	Lactococcus lactis subsp. cremoris KW2	51.323	99.474	0.511
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	50.265	99.474	0.5