Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   M6_RS01610 Genome accession   NC_006086
Coordinates   302382..302933 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes MGAS10394     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 297382..307933
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M6_RS01610 (M6_Spy0287) comX/sigX/comX2/sigX2 302382..302933 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  M6_RS01615 (M6_Spy0288) - 303492..304019 (+) 528 WP_021340513.1 YqeG family HAD IIIA-type phosphatase -
  M6_RS01620 (M6_Spy0289) yqeH 304019..305137 (+) 1119 WP_011184178.1 ribosome biogenesis GTPase YqeH -
  M6_RS01625 (M6_Spy0290) yhbY 305163..305471 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  M6_RS01630 (M6_Spy0291) - 305540..306172 (+) 633 WP_011184179.1 nicotinate-nucleotide adenylyltransferase -
  M6_RS01635 (M6_Spy0292) yqeK 306169..306762 (+) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  M6_RS01640 (M6_Spy0293) rsfS 306786..307139 (+) 354 WP_011017339.1 ribosome silencing factor -
  M6_RS01645 (M6_Spy0294) - 307187..307930 (+) 744 WP_014407307.1 class I SAM-dependent DNA methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=23440 M6_RS01610 WP_010921894.1 302382..302933(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes MGAS10394]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=23440 M6_RS01610 WP_010921894.1 302382..302933(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes MGAS10394]
ATGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.