Detailed information NTG0233174

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: C6P66_RS11780
• Genome accession: NZ_CP027373
• Coordinates: 2282661..2283644 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain 05-3629
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2277661..2288644

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C6P66_RS11760	dppA	2278961..2280568 (+)	1608	Protein_2138	dipeptide ABC transporter substrate-binding protein DppA	-
C6P66_RS11770	dppB	2280719..2281738 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
C6P66_RS11775	dppC	2281748..2282650 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
C6P66_RS11780	amiE	2282661..2283644 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
C6P66_RS11785	dppF	2283641..2284645 (+)	1005	WP_000107030.1	dipeptide ABC transporter ATP-binding subunit DppF	-
C6P66_RS11790	yhjV	2284675..2285946 (-)	1272	WP_106916244.1	aromatic amino acid transport family protein	-
C6P66_RS11805	ldrD	2286422..2286529 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
C6P66_RS11815	-	2286905..2287012 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
C6P66_RS11820	-	2287388..2287495 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=233174 C6P66_RS11780 WP_001196486.1 2282661..2283644(+) (amiE) [Escherichia coli strain 05-3629]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=233174 C6P66_RS11780 WP_001196486.1 2282661..2283644(+) (amiE) [Escherichia coli strain 05-3629]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404