Detailed information NTG0232488

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: S100027_RS19255
• Genome accession: NZ_CP021677
• Coordinates: 3661291..3661887 (+)
• Length: 198 a.a.
• NCBI ID: WP_003185550.1
• Uniprot ID: A0A1J6GJE1
• Organism: Bacillus licheniformis strain SRCM100027
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3656291..3666887

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S100027_RS19235 (S100027_03869)	-	3657363..3658811 (+)	1449	WP_003185545.1	glycoside hydrolase family 68 protein	-
S100027_RS19240 (S100027_03870)	-	3658888..3660435 (+)	1548	WP_003185547.1	glycoside hydrolase family 32 protein	-
S100027_RS19250 (S100027_03872)	-	3660733..3661050 (-)	318	WP_075223363.1	TM2 domain-containing protein	-
S100027_RS19255 (S100027_03873)	clpP	3661291..3661887 (+)	597	WP_003185550.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
S100027_RS19260 (S100027_03874)	-	3661967..3662542 (-)	576	WP_003185552.1	TIGR00730 family Rossman fold protein	-
S100027_RS19265 (S100027_03875)	-	3662654..3662989 (+)	336	WP_009329633.1	MazG nucleotide pyrophosphohydrolase domain-containing protein	-
S100027_RS19270 (S100027_03876)	-	3662976..3663953 (+)	978	WP_178378859.1	HD domain-containing protein	-
S100027_RS19275 (S100027_03877)	-	3664000..3665619 (-)	1620	WP_009329635.1	SulP family inorganic anion transporter	-
S100027_RS19280 (S100027_03878)	-	3665641..3666231 (-)	591	WP_003185560.1	beta-class carbonic anhydrase	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21803.99 Da
• Isoelectric Point: 4.7982

>NTDB_id=232488 S100027_RS19255 WP_003185550.1 3661291..3661887(+) (clpP) [Bacillus licheniformis strain SRCM100027]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPQVSTICTGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNKILAERTGQ
PLEVIERDTDRDNFKTAEEAKEYGLIDKVLTRNIDAQK

Nucleotide

• Length: 597 bp

>NTDB_id=232488 S100027_RS19255 WP_003185550.1 3661291..3661887(+) (clpP) [Bacillus licheniformis strain SRCM100027]
ATGAATTTAATACCTACAGTCATTGAACAGACGAACCGCGGGGAAAGAGCGTATGACATTTACTCACGCTTGTTGAAAGA
CCGTATCATTATGCTGGGATCAGCAATCGATGACAATGTTGCGAACTCCATCGTATCTCAGCTTCTATTCCTTGAAGCCG
AAGATCCAGAAAAAGATATCAGCATCTATATCAACAGCCCTGGCGGCTCCATCACAGCCGGTATGGCGATTTATGACACC
ATGCAGTTTATTAAACCGCAAGTCTCCACGATTTGTACGGGAATGGCGGCATCCATGGGTGCGTTCCTTCTTGCAGCCGG
CGAGAAAGGGAAGCGCTACGCTCTTCCAAACAGTGAAGTCATGATCCACCAGCCGCTTGGCGGAGCGCAGGGTCAGGCGA
CTGAAATTGAAATTGCCGCGAAACGCATTCTTTCATTGCGCGACAAGCTGAACAAAATCCTTGCAGAGCGCACTGGGCAG
CCGCTTGAAGTAATCGAGCGCGATACAGACCGCGACAACTTCAAAACGGCTGAAGAAGCAAAAGAATACGGCCTGATTGA
TAAAGTGCTTACACGCAATATCGACGCACAGAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

3D structure

• AlphaFold DB: A0A1J6GJE1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	92.386	99.495	0.919
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.229	96.97	0.662
clpP	Streptococcus thermophilus LMG 18311	58.031	97.475	0.566
clpP	Streptococcus thermophilus LMD-9	58.031	97.475	0.566
clpP	Lactococcus lactis subsp. cremoris KW2	56.995	97.475	0.556
clpP	Streptococcus pneumoniae Rx1	56.995	97.475	0.556
clpP	Streptococcus pneumoniae D39	56.995	97.475	0.556
clpP	Streptococcus pneumoniae R6	56.995	97.475	0.556
clpP	Streptococcus pneumoniae TIGR4	56.995	97.475	0.556
clpP	Streptococcus pyogenes JRS4	55.44	97.475	0.54
clpP	Streptococcus pyogenes MGAS315	55.44	97.475	0.54
clpP	Streptococcus mutans UA159	54.639	97.98	0.535
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	54.922	97.475	0.535