Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   CCX85_RS01415 Genome accession   NZ_CP021640
Coordinates   261142..261693 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain JS12     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 256142..266693
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CCX85_RS01415 (CCX85_01415) comX/sigX/comX2/sigX2 261142..261693 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  CCX85_RS01420 (CCX85_01420) - 262252..262779 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  CCX85_RS01425 (CCX85_01425) yqeH 262779..263897 (+) 1119 WP_015016688.1 ribosome biogenesis GTPase YqeH -
  CCX85_RS01430 (CCX85_01430) yhbY 263922..264230 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  CCX85_RS01435 (CCX85_01435) - 264299..264931 (+) 633 WP_011184179.1 nicotinate-nucleotide adenylyltransferase -
  CCX85_RS01440 (CCX85_01440) yqeK 264928..265521 (+) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  CCX85_RS01445 (CCX85_01445) rsfS 265545..265898 (+) 354 WP_162292725.1 ribosome silencing factor -
  CCX85_RS01450 (CCX85_01450) - 265946..266689 (+) 744 WP_014407307.1 class I SAM-dependent DNA methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=232096 CCX85_RS01415 WP_010921894.1 261142..261693(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain JS12]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=232096 CCX85_RS01415 WP_010921894.1 261142..261693(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain JS12]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.