Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   CCS05_RS07240 Genome accession   NZ_CP021456
Coordinates   1479528..1480805 (-) Length   425 a.a.
NCBI ID   WP_043023143.1    Uniprot ID   A0AAJ5FKW3
Organism   Levilactobacillus brevis strain ZLB004     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1474528..1485805
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CCS05_RS07235 (CCS05_07235) - 1477784..1479492 (-) 1709 Protein_1418 proline--tRNA ligase -
  CCS05_RS07240 (CCS05_07240) eeP 1479528..1480805 (-) 1278 WP_043023143.1 RIP metalloprotease RseP Regulator
  CCS05_RS07245 (CCS05_07245) - 1480901..1481692 (-) 792 WP_043023144.1 phosphatidate cytidylyltransferase -
  CCS05_RS07250 (CCS05_07250) - 1481714..1482502 (-) 789 WP_011668020.1 isoprenyl transferase -
  CCS05_RS07255 (CCS05_07255) - 1482605..1483027 (-) 423 WP_011668021.1 hypothetical protein -
  CCS05_RS07260 (CCS05_07260) frr 1483054..1483611 (-) 558 WP_021741162.1 ribosome recycling factor -
  CCS05_RS07265 (CCS05_07265) pyrH 1483614..1484336 (-) 723 WP_011668022.1 UMP kinase -
  CCS05_RS07270 (CCS05_07270) tsf 1484483..1485367 (-) 885 WP_011668023.1 translation elongation factor Ts -

Sequence


Protein


Download         Length: 425 a.a.        Molecular weight: 45983.26 Da        Isoelectric Point: 7.2020

>NTDB_id=230897 CCS05_RS07240 WP_043023143.1 1479528..1480805(-) (eeP) [Levilactobacillus brevis strain ZLB004]
MITTIITFIIVFGILVIVHEFGHFYFAKRGGILVREFSIGMGPKLVYHRGKDGTTYTLRLLPVGGYVRMAGAEDDEEELK
PGTPVSLYVGADEKVERINTSKKSTLFNGIPLEVTATDLEDELWIEGYENGDESAIKRYAVAHDATVIESDGTELQIAPK
DVQFQSASLGRRLMTNFAGPMNNILLAIVTFMLMSFAQGGVSMGTNQVQVADSPVSVAKQAGVKTNDKITAVNGRKTTSW
TDLSTAIQPLANKKTTLTIQRGSATKHITVTPKGETSNGKTVGMIGITQAQDKSIGAILASGFTQTWTMTKALFGALWHM
VSGHFSLNDLGGPVAIFATTSQATKFGLVGVLNFLAFLSINLAIVNLLPIPALDGGKILLNFIEAIRRKPLSENVEAAIT
LIGVGFLVLLMLLVTWNDIERYFIH

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=230897 CCS05_RS07240 WP_043023143.1 1479528..1480805(-) (eeP) [Levilactobacillus brevis strain ZLB004]
GTGATTACAACGATTATTACCTTTATCATTGTCTTTGGGATTTTGGTCATTGTCCATGAATTCGGGCATTTTTACTTTGC
CAAGCGAGGCGGCATTCTCGTCCGTGAATTCTCGATTGGAATGGGGCCAAAATTGGTTTACCACCGTGGCAAAGATGGCA
CGACTTACACACTGCGGTTATTACCAGTGGGCGGTTACGTCCGGATGGCGGGTGCTGAAGATGACGAAGAAGAGCTGAAA
CCGGGAACGCCAGTTAGCCTGTACGTGGGCGCTGACGAAAAGGTTGAACGAATCAATACCAGCAAAAAATCCACGTTATT
TAACGGTATTCCGTTAGAAGTTACCGCAACGGATCTAGAGGATGAGTTGTGGATTGAAGGCTATGAAAATGGTGACGAAA
GTGCCATTAAGCGCTATGCGGTTGCTCACGATGCCACGGTGATTGAAAGCGACGGGACGGAGCTACAAATTGCCCCGAAG
GACGTTCAATTTCAGTCGGCATCATTAGGCCGACGATTGATGACGAACTTCGCTGGACCGATGAACAATATCTTATTAGC
GATTGTTACCTTTATGCTGATGTCCTTTGCTCAGGGTGGCGTTTCAATGGGCACGAATCAGGTTCAAGTAGCTGATTCAC
CGGTATCAGTGGCGAAACAGGCTGGCGTGAAGACCAACGATAAGATTACGGCAGTCAACGGTCGAAAGACCACCAGCTGG
ACCGATCTTAGTACCGCGATTCAGCCATTGGCCAACAAAAAAACAACGCTGACGATTCAAAGAGGATCGGCGACCAAACA
CATTACAGTGACACCTAAAGGTGAAACTTCCAACGGTAAAACGGTGGGGATGATTGGGATCACGCAAGCCCAAGATAAGA
GCATTGGGGCCATCTTAGCTTCTGGATTTACACAGACGTGGACGATGACCAAAGCGTTGTTTGGGGCTTTGTGGCACATG
GTTTCTGGTCACTTTAGTTTGAACGATTTAGGCGGACCAGTCGCCATTTTTGCCACAACCTCACAGGCCACCAAGTTTGG
CTTGGTTGGCGTGTTAAATTTCTTAGCCTTTTTATCAATTAATTTGGCAATTGTGAACTTACTGCCGATTCCAGCCTTGG
ATGGTGGTAAAATATTATTAAACTTTATTGAAGCTATTCGGCGTAAGCCGCTTTCAGAAAATGTGGAAGCTGCCATTACG
TTGATTGGCGTGGGGTTCTTAGTTCTGCTTATGTTACTGGTGACGTGGAATGATATTGAACGCTACTTTATTCATTAA

Domains


Predicted by InterproScan.

(214-261)

(7-410)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.941

100

0.489

  eeP Streptococcus thermophilus LMD-9

48.941

100

0.489


Multiple sequence alignment