Detailed information NTG0023078

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CV_RS21190
• Genome accession: NC_005085
• Coordinates: 4601094..4602173 (+)
• Length: 359 a.a.
• NCBI ID: WP_011137813.1
• Uniprot ID: Q7NQ73
• Organism: Chromobacterium violaceum ATCC 12472
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 4596094..4607173

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CV_RS21165 (CV4262)	rsmB	4596218..4597468 (-)	1251	WP_011137808.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
CV_RS21170 (CV4263)	htpX	4597535..4598389 (-)	855	WP_011137809.1	zinc metalloprotease HtpX	-
CV_RS21175 (CV4264)	fmt	4598432..4599355 (-)	924	WP_011137810.1	methionyl-tRNA formyltransferase	-
CV_RS21180 (CV4265)	def	4599430..4599933 (-)	504	WP_011137811.1	peptide deformylase	-
CV_RS21185 (CV4266)	-	4600060..4601097 (+)	1038	WP_011137812.1	LysM peptidoglycan-binding domain-containing protein	-
CV_RS21190 (CV4267)	dprA	4601094..4602173 (+)	1080	WP_011137813.1	DNA-processing protein DprA	Machinery gene
CV_RS21195 (CV4268)	-	4602203..4602661 (+)	459	WP_011137814.1	DUF494 family protein	-
CV_RS21200 (CV4269)	topA	4602812..4605121 (+)	2310	WP_011137815.1	type I DNA topoisomerase	-
CV_RS23730 (CV4270)	-	4605219..4606496 (-)	1278	WP_011137816.1	hypothetical protein	-

Sequence

Protein

• Length: 359 a.a.
• Molecular weight: 37103.54 Da
• Isoelectric Point: 6.2323

>NTDB_id=23078 CV_RS21190 WP_011137813.1 4601094..4602173(+) (dprA) [Chromobacterium violaceum ATCC 12472]
MSGAPQAWLTLALTPGIGPVGFLKLIDAFGSAEAAAAARPAQTEKLVGREAAEALQAGAAAESAQAALAWAEGDGCHLIT
LLDADYPAQLAEAASPPPLLFARGRRELLARTMLAVVGSRAATQQGKRNAEDFASALAAHGYTIVSGLASGIDAAAHQGA
LAHPASTVAVIGTGIDRVYPASNRQLAHRVAEHGLILSEFPLGMGPLPGHFPRRNRIIAGLARGCLVVEAGIASGSLISA
RLAMENNRDVMAIPGSIHNAQARGCHRLIKDGARLVESVDDVLDEIGRLPAAPPPPLRQEEPETPPLLNSMGWEPVLADA
LAGTLGLTPGEVYAMLLELELAGRVASLPGGRFQRLAQL

Nucleotide

• Length: 1080 bp

>NTDB_id=23078 CV_RS21190 WP_011137813.1 4601094..4602173(+) (dprA) [Chromobacterium violaceum ATCC 12472]
ATGAGCGGCGCCCCGCAAGCCTGGCTGACGCTGGCGCTGACCCCCGGCATCGGCCCGGTCGGCTTCCTGAAGCTGATAGA
CGCGTTCGGCTCGGCCGAGGCCGCGGCCGCCGCCCGTCCCGCCCAAACCGAGAAGCTGGTGGGCCGCGAGGCGGCCGAAG
CGCTGCAGGCCGGCGCGGCGGCGGAATCGGCCCAGGCCGCGCTCGCCTGGGCCGAAGGCGACGGCTGCCACTTGATCACG
CTGCTCGACGCCGACTACCCGGCGCAGCTGGCCGAAGCCGCGTCGCCGCCGCCGCTGCTGTTCGCGCGCGGCCGGCGCGA
GCTGCTGGCGCGGACCATGCTGGCCGTGGTCGGCAGCCGGGCTGCCACCCAGCAGGGCAAGCGCAACGCCGAGGACTTCG
CGTCGGCGCTGGCCGCCCACGGCTACACCATCGTCAGCGGCCTGGCCAGCGGCATCGACGCCGCCGCCCACCAGGGCGCG
CTCGCGCATCCGGCCTCCACCGTCGCGGTGATCGGCACCGGCATCGACCGCGTCTACCCGGCGTCCAACCGCCAGCTCGC
CCACCGCGTCGCCGAGCACGGGCTGATCCTGTCCGAGTTCCCGCTGGGCATGGGCCCGCTGCCCGGCCACTTCCCGCGCC
GCAACCGCATCATCGCCGGCCTAGCCCGCGGCTGCCTGGTGGTGGAGGCCGGCATCGCGTCCGGCTCGCTGATCAGCGCG
CGGCTGGCGATGGAGAACAACCGCGACGTGATGGCGATACCGGGCAGCATCCACAACGCCCAGGCGCGCGGCTGCCACCG
GCTGATCAAGGATGGCGCGCGGCTGGTGGAGAGCGTCGACGACGTGCTGGACGAGATCGGCCGGCTGCCGGCTGCGCCAC
CGCCGCCCCTCCGGCAAGAAGAGCCGGAAACGCCGCCGCTGTTGAACAGCATGGGTTGGGAGCCGGTGCTGGCGGACGCG
CTGGCCGGGACGCTCGGGTTGACTCCCGGGGAGGTTTACGCGATGCTGCTCGAACTGGAACTGGCCGGCCGCGTGGCCAG
CCTGCCGGGCGGCCGCTTCCAGCGGCTCGCACAACTCTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (72-277)

• DprA winged helix domain (DprA_WH) (291-351)

3D structure

• AlphaFold DB: Q7NQ73

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria meningitidis MC58	46.41	100	0.504
dprA	Neisseria meningitidis strain C311	46.41	100	0.504
dprA	Neisseria gonorrhoeae strain FA1090	46.649	100	0.504
dprA	Neisseria gonorrhoeae MS11	46.134	100	0.499
dprA	Vibrio campbellii strain DS40M4	41.389	100	0.415
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	39.833	100	0.398
dprA	Legionella pneumophila strain ERS1305867	46.758	81.616	0.382
dprA	Vibrio cholerae strain A1552	36.757	100	0.379
dprA	Acinetobacter baylyi ADP1	36.415	99.443	0.362