Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   SAG_RS05815 Genome accession   NC_004116
Coordinates   599028..599207 (+) Length   59 a.a.
NCBI ID   WP_000965642.1    Uniprot ID   Q8E0V9
Organism   Streptococcus agalactiae 2603V/R     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 594028..604207
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAG_RS05780 (SAG0600) - 594903..595232 (+) 330 WP_000494205.1 DUF1366 domain-containing protein -
  SAG_RS05785 (SAG0601) - 595207..595419 (+) 213 WP_000698337.1 CD1375 family protein -
  SAG_RS05790 (SAG0602) - 595432..595734 (+) 303 WP_000215499.1 hypothetical protein -
  SAG_RS05795 (SAG0603) - 595736..596071 (+) 336 WP_001001742.1 phage holin -
  SAG_RS05800 (SAG0604) - 596073..596792 (+) 720 WP_000236381.1 peptidoglycan amidohydrolase family protein -
  SAG_RS05805 (SAG0605) - 597125..598096 (+) 972 WP_000812952.1 Abi family protein -
  SAG_RS05810 (SAG0606) - 598200..598400 (+) 201 WP_000076715.1 CsbD family protein -
  SAG_RS13445 (SAG0607) - 598441..598611 (-) 171 WP_000356856.1 hypothetical protein -
  SAG_RS13685 - 598747..598872 (-) 126 WP_017285425.1 hypothetical protein -
  SAG_RS05815 (SAG0608) prx 599028..599207 (+) 180 WP_000965642.1 hypothetical protein Regulator
  SAG_RS05820 (SAG0609) - 599307..599888 (-) 582 WP_025193995.1 site-specific integrase -
  SAG_RS13545 - 599924..600190 (-) 267 WP_001872365.1 hypothetical protein -
  SAG_RS13590 - 600196..601573 (+) 1378 Protein_597 IS3 family transposase -
  SAG_RS05850 (SAG0612) - 601746..601907 (-) 162 WP_000508795.1 TM2 domain-containing protein -
  SAG_RS05855 (SAG0613) - 602649..603926 (+) 1278 WP_000594360.1 ABC transporter permease -

Sequence


Protein


Download         Length: 59 a.a.        Molecular weight: 6842.78 Da        Isoelectric Point: 4.3085

>NTDB_id=22873 SAG_RS05815 WP_000965642.1 599028..599207(+) (prx) [Streptococcus agalactiae 2603V/R]
MLYIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLPHEEVRDDEVVTVESVEEVLRELK

Nucleotide


Download         Length: 180 bp        

>NTDB_id=22873 SAG_RS05815 WP_000965642.1 599028..599207(+) (prx) [Streptococcus agalactiae 2603V/R]
ATGTTATATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGTGCGTAAAAA
CGGAAAGATATTTGATTATGTGTTGCCGCACGAGGAAGTGAGAGATGATGAAGTTGTGACAGTTGAGAGTGTAGAAGAGG
TGTTGAGGGAATTGAAGTGA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8E0V9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

77.586

98.305

0.763

  prx Streptococcus pyogenes MGAS8232

74.138

98.305

0.729

  prx Streptococcus pyogenes MGAS315

68.966

98.305

0.678

  prx Streptococcus pyogenes MGAS315

93.023

72.881

0.678

  prx Streptococcus pyogenes MGAS315

67.241

98.305

0.661

  prx Streptococcus pyogenes MGAS315

78.049

69.492

0.542

  prx Streptococcus pyogenes MGAS315

76.19

71.186

0.542


Multiple sequence alignment