Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | CAH07_RS03555 | Genome accession | NZ_CP021123 |
| Coordinates | 696901..697494 (-) | Length | 197 a.a. |
| NCBI ID | WP_003228214.1 | Uniprot ID | A0A199WEF2 |
| Organism | Bacillus subtilis strain SEM-9 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 691901..702494
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CAH07_RS03540 (CAH07_03500) | mdxK | 692227..694500 (+) | 2274 | WP_029318353.1 | maltose phosphorylase | - |
| CAH07_RS03545 (CAH07_03505) | malL | 694493..696178 (+) | 1686 | WP_029318354.1 | oligo-1,6-glucosidase | - |
| CAH07_RS03550 (CAH07_03510) | pgmB | 696175..696855 (+) | 681 | WP_029318355.1 | beta-phosphoglucomutase | - |
| CAH07_RS03555 (CAH07_03515) | clpP | 696901..697494 (-) | 594 | WP_003228214.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| CAH07_RS03565 (CAH07_03525) | cotR | 698123..699085 (-) | 963 | WP_015251166.1 | sporulation hydrolase CotR | - |
| CAH07_RS03570 (CAH07_03530) | cotNP | 699441..700784 (+) | 1344 | WP_003228217.1 | FAD-binding oxidoreductase | - |
| CAH07_RS03575 (CAH07_03535) | yvdQ | 701036..701548 (+) | 513 | WP_003243249.1 | DUF3231 family protein | - |
| CAH07_RS03580 (CAH07_03540) | psmB | 701584..701904 (-) | 321 | WP_003228222.1 | QacE family quaternary ammonium compound efflux SMR transporter | - |
| CAH07_RS03585 (CAH07_03545) | psmA | 701904..702239 (-) | 336 | WP_014480966.1 | SMR family transporter | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 21682.00 Da Isoelectric Point: 4.9416
>NTDB_id=228368 CAH07_RS03555 WP_003228214.1 696901..697494(-) (clpP) [Bacillus subtilis strain SEM-9]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK
Nucleotide
Download Length: 594 bp
>NTDB_id=228368 CAH07_RS03555 WP_003228214.1 696901..697494(-) (clpP) [Bacillus subtilis strain SEM-9]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGCAGCAG
AAGACCCTGAAAAAGAAATTTCTCTTTACATCAACAGCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCCTGCTTGCAGCCGG
CGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTCATGATTCACCAGCCTCTTGGCGGTGCGCAAGGTCAGGCGA
CAGAAATTGAAATTGCCGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTCCTTGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGCGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTTTGACTCACACAGAAGATAAAAAGTAA
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGCAGCAG
AAGACCCTGAAAAAGAAATTTCTCTTTACATCAACAGCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCCTGCTTGCAGCCGG
CGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTCATGATTCACCAGCCTCTTGGCGGTGCGCAAGGTCAGGCGA
CAGAAATTGAAATTGCCGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTCCTTGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGCGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTTTGACTCACACAGAAGATAAAAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.617 |
95.431 |
0.655 |
| clpP | Streptococcus thermophilus LMG 18311 |
58.163 |
99.492 |
0.579 |
| clpP | Streptococcus thermophilus LMD-9 |
58.163 |
99.492 |
0.579 |
| clpP | Streptococcus pneumoniae D39 |
57.812 |
97.462 |
0.563 |
| clpP | Streptococcus pneumoniae Rx1 |
57.812 |
97.462 |
0.563 |
| clpP | Streptococcus pneumoniae R6 |
57.812 |
97.462 |
0.563 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.812 |
97.462 |
0.563 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
57.895 |
96.447 |
0.558 |
| clpP | Streptococcus pyogenes JRS4 |
56.122 |
99.492 |
0.558 |
| clpP | Streptococcus pyogenes MGAS315 |
56.122 |
99.492 |
0.558 |
| clpP | Streptococcus mutans UA159 |
54.822 |
100 |
0.548 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
55.789 |
96.447 |
0.538 |