Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | CAB88_RS14230 | Genome accession | NZ_CP021061 |
| Coordinates | 2668169..2668750 (-) | Length | 193 a.a. |
| NCBI ID | WP_000991612.1 | Uniprot ID | A0AAN4HHP4 |
| Organism | Bacillus thuringiensis strain ATCC 10792 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2663169..2673750
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CAB88_RS14200 (CAB88_14185) | - | 2663796..2664296 (-) | 501 | WP_003291689.1 | HIT family protein | - |
| CAB88_RS14205 (CAB88_14190) | - | 2664388..2664555 (-) | 168 | WP_000508400.1 | hypothetical protein | - |
| CAB88_RS33520 | - | 2664773..2665008 (+) | 236 | Protein_2671 | hypothetical protein | - |
| CAB88_RS14215 (CAB88_14200) | - | 2665062..2665898 (-) | 837 | WP_001084752.1 | proline/glycine betaine ABC transporter permease | - |
| CAB88_RS14220 (CAB88_14205) | - | 2665891..2667096 (-) | 1206 | WP_000370603.1 | glycine betaine/L-proline ABC transporter ATP-binding protein | - |
| CAB88_RS14225 (CAB88_14210) | - | 2667268..2668125 (+) | 858 | WP_001227615.1 | glycine betaine ABC transporter substrate-binding protein | - |
| CAB88_RS14230 (CAB88_14215) | clpP | 2668169..2668750 (-) | 582 | WP_000991612.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| CAB88_RS14235 (CAB88_14220) | - | 2668772..2669458 (-) | 687 | WP_000337521.1 | RNA polymerase subunit sigma-70 | - |
| CAB88_RS14240 (CAB88_14225) | - | 2669601..2669921 (+) | 321 | WP_001125388.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| CAB88_RS14245 (CAB88_14230) | rpiA | 2669926..2670588 (+) | 663 | WP_001049982.1 | ribose 5-phosphate isomerase A | - |
| CAB88_RS14250 (CAB88_14235) | - | 2670700..2671134 (+) | 435 | WP_001190870.1 | GNAT family N-acetyltransferase | - |
| CAB88_RS14255 (CAB88_14240) | - | 2671261..2672628 (-) | 1368 | WP_001065156.1 | lytic polysaccharide monooxygenase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21250.48 Da Isoelectric Point: 4.9174
>NTDB_id=228071 CAB88_RS14230 WP_000991612.1 2668169..2668750(-) (clpP) [Bacillus thuringiensis strain ATCC 10792]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKEYGIVDDVVTKK
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKEYGIVDDVVTKK
Nucleotide
Download Length: 582 bp
>NTDB_id=228071 CAB88_RS14230 WP_000991612.1 2668169..2668750(-) (clpP) [Bacillus thuringiensis strain ATCC 10792]
ATGAATGCAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGCATTATTATTATCGGTTCAGAAATTAATGATCAAGTAGCGAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCAG
AAGATGCAGAGAAAGATATATTCTTATACATCAATAGCCCCGGCGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTGTGCATGGGCTTTGCGGCATCATTTGGTGCATTGCTATTATTATCTGG
AGCAAAAGGAAAACGGTTTGCGCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGCCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGAATATGGGATTGTAGA
CGATGTTGTTACGAAAAAATAA
ATGAATGCAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGCATTATTATTATCGGTTCAGAAATTAATGATCAAGTAGCGAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCAG
AAGATGCAGAGAAAGATATATTCTTATACATCAATAGCCCCGGCGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTGTGCATGGGCTTTGCGGCATCATTTGGTGCATTGCTATTATTATCTGG
AGCAAAAGGAAAACGGTTTGCGCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGCCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGAATATGGGATTGTAGA
CGATGTTGTTACGAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
69.11 |
98.964 |
0.684 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.725 |
97.927 |
0.663 |
| clpP | Streptococcus thermophilus LMD-9 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pneumoniae Rx1 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pneumoniae D39 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pneumoniae TIGR4 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pneumoniae R6 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus thermophilus LMG 18311 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes JRS4 |
55.556 |
97.927 |
0.544 |
| clpP | Streptococcus pyogenes MGAS315 |
55.556 |
97.927 |
0.544 |
| clpP | Streptococcus mutans UA159 |
53.968 |
97.927 |
0.528 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
52.91 |
97.927 |
0.518 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.794 |
97.927 |
0.497 |