Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   SPS_RS04075 Genome accession   NC_004606
Coordinates   758959..759141 (+) Length   60 a.a.
NCBI ID   WP_011054671.1    Uniprot ID   Q4VUT1
Organism   Streptococcus pyogenes SSI-1     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 753959..764141
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPS_RS04045 (SPs0765) - 755013..755444 (+) 432 WP_011054673.1 DUF1617 family protein -
  SPS_RS04050 - 755447..756061 (+) 615 WP_011054672.1 DUF1366 domain-containing protein -
  SPS_RS04055 (SPs0767) - 756072..756527 (+) 456 WP_002983475.1 phage holin family protein -
  SPS_RS04065 (SPs0769) - 756639..757853 (+) 1215 WP_002983477.1 peptidoglycan amidohydrolase family protein -
  SPS_RS04070 (SPs0770) - 758098..758892 (+) 795 WP_002983479.1 DNA/RNA non-specific endonuclease -
  SPS_RS04075 (SPs0771) prx 758959..759141 (+) 183 WP_011054671.1 hypothetical protein Regulator
  SPS_RS04080 (SPs0772) - 759671..761533 (+) 1863 WP_011106710.1 heavy metal translocating P-type ATPase -
  SPS_RS04085 (SPs0774) - 761833..762768 (-) 936 WP_011054669.1 dihydroorotate oxidase -
  SPS_RS04090 (SPs0775) - 763007..763702 (+) 696 WP_002983928.1 phosphoglycerate mutase -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6978.99 Da        Isoelectric Point: 4.3466

>NTDB_id=22804 SPS_RS04075 WP_011054671.1 758959..759141(+) (prx) [Streptococcus pyogenes SSI-1]
MLTYDEFKQAIDRGYITADTVMIVRKNGQIFDYVLPNEKIKNGEIVTDEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=22804 SPS_RS04075 WP_011054671.1 758959..759141(+) (prx) [Streptococcus pyogenes SSI-1]
ATGCTAACATACGACGAATTTAAGCAAGCTATTGACCGTGGATATATCACAGCAGACACAGTAATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCGAATGAGAAGATAAAGAATGGAGAAATTGTGACAGACGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1

  prx Streptococcus pyogenes MGAS8232

85

100

0.85

  prx Streptococcus pyogenes MGAS315

78.333

100

0.783

  prx Streptococcus pyogenes MGAS315

73.333

100

0.733

  prx Streptococcus pyogenes MGAS315

83.721

71.667

0.6

  prx Streptococcus pyogenes MGAS315

82.927

68.333

0.567

  prx Streptococcus pyogenes MGAS315

71.429

70

0.5


Multiple sequence alignment