Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   SPS_RS02485 Genome accession   NC_004606
Coordinates   485978..486160 (+) Length   60 a.a.
NCBI ID   WP_011054856.1    Uniprot ID   -
Organism   Streptococcus pyogenes SSI-1     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 480978..491160
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPS_RS02450 - 481367..481984 (+) 618 WP_011184056.1 DUF1366 domain-containing protein -
  SPS_RS02455 (SPs0451) - 481994..482266 (+) 273 WP_002986916.1 DUF7365 family protein -
  SPS_RS02460 (SPs0452) - 482263..482490 (+) 228 WP_003058873.1 phage holin -
  SPS_RS02470 - 482606..483808 (+) 1203 WP_011184057.1 glucosaminidase domain-containing protein -
  SPS_RS02475 (SPs0454) - 484130..484645 (+) 516 WP_023077389.1 hypothetical protein -
  SPS_RS02480 (SPs0455) - 484759..485745 (-) 987 WP_011106647.1 DNA/RNA non-specific endonuclease -
  SPS_RS02485 (SPs0456) prx 485978..486160 (+) 183 WP_011054856.1 hypothetical protein Regulator
  SPS_RS02490 (SPs0457) proB 486350..487171 (+) 822 WP_011054855.1 glutamate 5-kinase -
  SPS_RS02495 (SPs0458) - 487164..488414 (+) 1251 WP_011054854.1 glutamate-5-semialdehyde dehydrogenase -
  SPS_RS02500 - 488434..488655 (+) 222 WP_159314947.1 hypothetical protein -
  SPS_RS10175 - 488698..488862 (+) 165 WP_002994245.1 hypothetical protein -
  SPS_RS02505 (SPs0459) rsmH 488949..489899 (+) 951 WP_002988893.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  SPS_RS02510 (SPs0460) ftsL 489904..490227 (+) 324 WP_002988895.1 cell division protein FtsL -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6927.67 Da        Isoelectric Point: 3.9286

>NTDB_id=22795 SPS_RS02485 WP_011054856.1 485978..486160(+) (prx) [Streptococcus pyogenes SSI-1]
MLTYDEFKQAIDDGYITGDTVAIVRKNGQIFDYALPNEEVRNGEVVTYENVEEVLRELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=22795 SPS_RS02485 WP_011054856.1 485978..486160(+) (prx) [Streptococcus pyogenes SSI-1]
ATGCTAACATACGATGAGTTTAAGCAAGCTATTGATGACGGATATATCACAGGCGACACAGTGGCGATCGTGCGCAAAAA
CGGACAGATTTTTGATTATGCGTTGCCGAATGAAGAGGTAAGAAATGGGGAGGTTGTAACATACGAAAATGTGGAAGAAG
TGCTGAGGGAATTAGACAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1

  prx Streptococcus pyogenes MGAS8232

80

100

0.8

  prx Streptococcus pyogenes MGAS315

78.333

100

0.783

  prx Streptococcus pyogenes MGAS315

75

100

0.75

  prx Streptococcus pyogenes MGAS315

88.372

71.667

0.633

  prx Streptococcus pyogenes MGAS315

87.805

68.333

0.6

  prx Streptococcus pyogenes MGAS315

76.19

70

0.533


Multiple sequence alignment