Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   SPYM18_RS07505 Genome accession   NC_003485
Coordinates   1451844..1452026 (-) Length   60 a.a.
NCBI ID   WP_011018104.1    Uniprot ID   -
Organism   Streptococcus pyogenes MGAS8232     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1446844..1457026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYM18_RS07480 (spyM18_1739) - 1447172..1447528 (+) 357 WP_011018102.1 hypothetical protein -
  SPYM18_RS07485 (spyM18_1741) brpA 1447639..1448922 (-) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  SPYM18_RS07490 (spyM18_1742) - 1448931..1449455 (-) 525 WP_002983369.1 GNAT family N-acetyltransferase -
  SPYM18_RS07495 (spyM18_1743) tsaE 1449430..1449891 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SPYM18_RS07500 (spyM18_1744) - 1450045..1451505 (-) 1461 WP_011018103.1 NCS2 family permease -
  SPYM18_RS07505 (spyM18_1745) prx 1451844..1452026 (-) 183 WP_011018104.1 hypothetical protein Regulator
  SPYM18_RS07510 (spyM18_1746) sda 1452266..1453264 (+) 999 WP_011018105.1 streptodornase A -
  SPYM18_RS07515 (spyM18_1747) - 1453405..1453965 (-) 561 WP_011018106.1 GNAT family N-acetyltransferase -
  SPYM18_RS07520 (spyM18_1749) - 1453998..1454162 (-) 165 WP_021340366.1 hypothetical protein -
  SPYM18_RS07525 (spyM18_1750) - 1454311..1455516 (-) 1206 WP_011018108.1 glucosaminidase domain-containing protein -
  SPYM18_RS07535 - 1455629..1455823 (-) 195 WP_023079604.1 hypothetical protein -
  SPYM18_RS07540 (spyM18_1753) - 1455820..1456119 (-) 300 WP_011018110.1 hypothetical protein -
  SPYM18_RS07545 (spyM18_1754) - 1456130..1456747 (-) 618 WP_011018111.1 DUF1366 domain-containing protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6935.81 Da        Isoelectric Point: 3.9417

>NTDB_id=22602 SPYM18_RS07505 WP_011018104.1 1451844..1452026(-) (prx) [Streptococcus pyogenes MGAS8232]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPHEEARNGEVVTEEVVEEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=22602 SPYM18_RS07505 WP_011018104.1 1451844..1452026(-) (prx) [Streptococcus pyogenes MGAS8232]
ATGCTAACATACGACGAATTTAAGCAAGCGATTGACAATGGATATATCACAGCAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAAGAAGCGAGAAATGGAGAAGTTGTGACCGAGGAGGTAGTGGAAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817
  prx Streptococcus pyogenes MGAS8232

80

100

0.8
  prx Streptococcus pyogenes MGAS315

76.667

100

0.767
  prx Streptococcus pyogenes MGAS315

93.023

71.667

0.667