Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | B5S57_RS15135 | Genome accession | NZ_CP020534 |
| Coordinates | 2041669..2041968 (-) | Length | 99 a.a. |
| NCBI ID | WP_017047776.1 | Uniprot ID | A0A1Y0NUT1 |
| Organism | Vibrio anguillarum strain 425 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2036669..2046968
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B5S57_RS15110 (B5S57_14985) | lapB | 2037084..2038253 (-) | 1170 | WP_026028046.1 | lipopolysaccharide assembly protein LapB | - |
| B5S57_RS15115 (B5S57_14990) | - | 2038273..2038548 (-) | 276 | WP_013857177.1 | LapA family protein | - |
| B5S57_RS15120 (B5S57_14995) | ihfB | 2038690..2038974 (-) | 285 | WP_010317449.1 | integration host factor subunit beta | - |
| B5S57_RS15125 (B5S57_15000) | rpsA | 2039051..2040721 (-) | 1671 | WP_013857179.1 | 30S ribosomal protein S1 | - |
| B5S57_RS15130 (B5S57_15005) | cmk | 2040825..2041505 (-) | 681 | WP_013857180.1 | (d)CMP kinase | - |
| B5S57_RS15135 (B5S57_15010) | comEA | 2041669..2041968 (-) | 300 | WP_017047776.1 | ComEA family DNA-binding protein | Machinery gene |
| B5S57_RS15140 (B5S57_15015) | ppiD | 2042105..2043970 (-) | 1866 | WP_013857182.1 | peptidylprolyl isomerase | - |
| B5S57_RS15145 (B5S57_15020) | - | 2044128..2044400 (-) | 273 | WP_026027116.1 | HU family DNA-binding protein | - |
| B5S57_RS15150 (B5S57_15025) | lon | 2044596..2046947 (-) | 2352 | WP_013857184.1 | endopeptidase La | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10804.74 Da Isoelectric Point: 9.6909
>NTDB_id=223955 B5S57_RS15135 WP_017047776.1 2041669..2041968(-) (comEA) [Vibrio anguillarum strain 425]
MKLKTKLGLLLLSIVLPLSPTLAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAVTVRQNAERIIL
MKLKTKLGLLLLSIVLPLSPTLAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAVTVRQNAERIIL
Nucleotide
Download Length: 300 bp
>NTDB_id=223955 B5S57_RS15135 WP_017047776.1 2041669..2041968(-) (comEA) [Vibrio anguillarum strain 425]
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGACATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGCATTGGTGCCGTTACTGTCAGGCAAAACGCTGAGCGTATCATTTTATAA
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGACATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGCATTGGTGCCGTTACTGTCAGGCAAAACGCTGAGCGTATCATTTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
59.223 |
100 |
0.616 |
| comEA | Vibrio cholerae strain A1552 |
59.223 |
100 |
0.616 |
| comEA | Vibrio campbellii strain DS40M4 |
58.163 |
98.99 |
0.576 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
58.889 |
90.909 |
0.535 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
39.286 |
100 |
0.444 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
40 |
100 |
0.444 |
| comEA | Legionella pneumophila str. Paris |
36.735 |
98.99 |
0.364 |
| comEA | Legionella pneumophila strain ERS1305867 |
36.735 |
98.99 |
0.364 |