Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | C2I05_RS02820 | Genome accession | NZ_CP026039 |
| Coordinates | 488047..489174 (+) | Length | 375 a.a. |
| NCBI ID | WP_249848112.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain PK1_2 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 483047..494174
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2I05_RS02795 | - | 484407..484741 (-) | 335 | Protein_557 | aspartate phosphatase | - |
| C2I05_RS02800 (C2I05_02780) | - | 484830..485981 (-) | 1152 | WP_249848118.1 | DNA-processing protein DprA | - |
| C2I05_RS02805 (C2I05_02785) | - | 486025..486570 (-) | 546 | WP_249855469.1 | hypothetical protein | - |
| C2I05_RS02810 (C2I05_02790) | - | 486552..487205 (-) | 654 | WP_249855470.1 | hypothetical protein | - |
| C2I05_RS02815 (C2I05_02795) | - | 487217..487726 (-) | 510 | WP_249848114.1 | HAD family hydrolase | - |
| C2I05_RS02820 (C2I05_02800) | rapC | 488047..489174 (+) | 1128 | WP_249848112.1 | response regulator aspartate phosphatase RapE | Regulator |
| C2I05_RS02825 (C2I05_02805) | phrE | 489164..489298 (+) | 135 | WP_014114495.1 | phosphatase RapE inhibitor PhrE | - |
| C2I05_RS02830 (C2I05_02810) | - | 489408..489567 (+) | 160 | Protein_564 | hypothetical protein | - |
| C2I05_RS02835 (C2I05_02815) | yqcG | 489937..491532 (+) | 1596 | WP_249848109.1 | LXG family T7SS effector endonuclease toxin YqcG | - |
| C2I05_RS02840 (C2I05_02820) | yqcF | 491547..492125 (+) | 579 | WP_249848107.1 | type VII secretion system immunity protein YqcF | - |
| C2I05_RS02845 (C2I05_02825) | - | 492238..492630 (+) | 393 | WP_087961312.1 | immunity 50 family protein | - |
| C2I05_RS02850 (C2I05_02830) | - | 492640..493080 (+) | 441 | Protein_568 | SMI1/KNR4 family protein | - |
| C2I05_RS02855 (C2I05_02835) | - | 493273..493818 (-) | 546 | WP_087961310.1 | SMI1/KNR4 family protein | - |
Sequence
Protein
Download Length: 375 a.a. Molecular weight: 44587.41 Da Isoelectric Point: 7.5503
>NTDB_id=222913 C2I05_RS02820 WP_249848112.1 488047..489174(+) (rapC) [Bacillus subtilis strain PK1_2]
MISITSAEVGMKINEWHRHIQKFNVTDAEMLKAEIERDIEVMEEDQDLLIYYQLMAFRHKIMLEYTLPSDENRMELSEYL
KKIEGHKKKLDNMRAYYYNCFRGMYEFRNGEYTKAITYYKKAERKIPTISDKIEKAEFYFKLSEVYYHMKMTHISMHYAE
LSYNIYKKHELYSVRRIQCHFVIAGNYDDLENHEKALPHLQEALKGAELLKSKNTHIYATAFFNLGNCYHKMDNLNKAAR
YIEQALVHYRKINSDVLPQAYHDLALIYFKQGKKEQAMDCFRKGIRSAVDFKDELFMNLFEALDVLYIRNGDTPKLLNIF
SRLENGKGYPYLEELALLGGNLFDYNGKIEDSIICFKKMVYAQKQISKGECMYEI
MISITSAEVGMKINEWHRHIQKFNVTDAEMLKAEIERDIEVMEEDQDLLIYYQLMAFRHKIMLEYTLPSDENRMELSEYL
KKIEGHKKKLDNMRAYYYNCFRGMYEFRNGEYTKAITYYKKAERKIPTISDKIEKAEFYFKLSEVYYHMKMTHISMHYAE
LSYNIYKKHELYSVRRIQCHFVIAGNYDDLENHEKALPHLQEALKGAELLKSKNTHIYATAFFNLGNCYHKMDNLNKAAR
YIEQALVHYRKINSDVLPQAYHDLALIYFKQGKKEQAMDCFRKGIRSAVDFKDELFMNLFEALDVLYIRNGDTPKLLNIF
SRLENGKGYPYLEELALLGGNLFDYNGKIEDSIICFKKMVYAQKQISKGECMYEI
Nucleotide
Download Length: 1128 bp
>NTDB_id=222913 C2I05_RS02820 WP_249848112.1 488047..489174(+) (rapC) [Bacillus subtilis strain PK1_2]
TTGATATCAATCACATCAGCTGAAGTGGGAATGAAGATTAATGAATGGCATAGGCATATTCAAAAATTCAACGTAACTGA
TGCTGAAATGTTAAAAGCTGAAATAGAACGTGATATAGAGGTTATGGAAGAAGATCAAGATTTGCTTATTTATTATCAAC
TAATGGCCTTTCGACATAAGATCATGTTGGAATACACACTGCCATCTGATGAAAACCGAATGGAACTTTCAGAATATTTG
AAGAAAATCGAAGGACATAAGAAGAAGCTGGACAATATGCGAGCGTATTATTATAACTGCTTCCGCGGGATGTATGAGTT
TAGAAACGGTGAATACACAAAGGCCATTACATATTACAAAAAAGCTGAACGCAAAATTCCAACGATCTCCGACAAGATTG
AAAAAGCTGAGTTTTATTTTAAGTTATCCGAAGTCTATTATCATATGAAGATGACTCACATCTCAATGCACTACGCTGAA
CTTTCATACAACATCTATAAAAAACATGAACTTTATTCTGTTCGGCGTATTCAGTGCCATTTTGTTATTGCTGGCAACTA
TGATGACCTTGAAAATCATGAAAAAGCTCTCCCCCACCTTCAAGAAGCTTTAAAAGGTGCTGAGCTGCTTAAAAGTAAAA
ATACTCACATCTATGCCACCGCATTTTTCAATCTCGGTAACTGCTATCACAAAATGGACAACCTAAATAAGGCTGCACGT
TACATCGAACAAGCTTTGGTTCATTACAGAAAAATTAACTCTGACGTACTTCCACAGGCCTATCATGACCTAGCGTTGAT
TTATTTTAAACAAGGCAAAAAAGAACAAGCAATGGATTGCTTCCGCAAAGGAATCAGAAGCGCCGTAGACTTTAAAGACG
AACTTTTTATGAACTTATTTGAAGCATTAGACGTTCTTTATATAAGAAATGGCGATACACCTAAACTCCTCAACATTTTC
TCTCGTTTAGAGAATGGCAAAGGATACCCTTATCTGGAAGAGCTGGCATTGTTAGGAGGCAACCTTTTCGATTATAATGG
AAAAATAGAGGATAGTATCATCTGTTTCAAGAAGATGGTATATGCTCAAAAGCAAATATCGAAAGGGGAATGCATGTATG
AAATCTAA
TTGATATCAATCACATCAGCTGAAGTGGGAATGAAGATTAATGAATGGCATAGGCATATTCAAAAATTCAACGTAACTGA
TGCTGAAATGTTAAAAGCTGAAATAGAACGTGATATAGAGGTTATGGAAGAAGATCAAGATTTGCTTATTTATTATCAAC
TAATGGCCTTTCGACATAAGATCATGTTGGAATACACACTGCCATCTGATGAAAACCGAATGGAACTTTCAGAATATTTG
AAGAAAATCGAAGGACATAAGAAGAAGCTGGACAATATGCGAGCGTATTATTATAACTGCTTCCGCGGGATGTATGAGTT
TAGAAACGGTGAATACACAAAGGCCATTACATATTACAAAAAAGCTGAACGCAAAATTCCAACGATCTCCGACAAGATTG
AAAAAGCTGAGTTTTATTTTAAGTTATCCGAAGTCTATTATCATATGAAGATGACTCACATCTCAATGCACTACGCTGAA
CTTTCATACAACATCTATAAAAAACATGAACTTTATTCTGTTCGGCGTATTCAGTGCCATTTTGTTATTGCTGGCAACTA
TGATGACCTTGAAAATCATGAAAAAGCTCTCCCCCACCTTCAAGAAGCTTTAAAAGGTGCTGAGCTGCTTAAAAGTAAAA
ATACTCACATCTATGCCACCGCATTTTTCAATCTCGGTAACTGCTATCACAAAATGGACAACCTAAATAAGGCTGCACGT
TACATCGAACAAGCTTTGGTTCATTACAGAAAAATTAACTCTGACGTACTTCCACAGGCCTATCATGACCTAGCGTTGAT
TTATTTTAAACAAGGCAAAAAAGAACAAGCAATGGATTGCTTCCGCAAAGGAATCAGAAGCGCCGTAGACTTTAAAGACG
AACTTTTTATGAACTTATTTGAAGCATTAGACGTTCTTTATATAAGAAATGGCGATACACCTAAACTCCTCAACATTTTC
TCTCGTTTAGAGAATGGCAAAGGATACCCTTATCTGGAAGAGCTGGCATTGTTAGGAGGCAACCTTTTCGATTATAATGG
AAAAATAGAGGATAGTATCATCTGTTTCAAGAAGATGGTATATGCTCAAAAGCAAATATCGAAAGGGGAATGCATGTATG
AAATCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
40.633 |
100 |
0.411 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
37.931 |
100 |
0.381 |