Detailed information NTG0022284

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: SAG_RS10555
• Genome accession: NC_004116
• Coordinates: 1590344..1590934 (-)
• Length: 196 a.a.
• NCBI ID: WP_000613483.1
• Uniprot ID: A0AAV3JHA0
• Organism: Streptococcus agalactiae 2603V/R
• Function: degradation of ComX (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	1589092..1590225	1590344..1590934	flank	119

Gene organization within MGE regions

Location: 1589092..1590934

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SAG_RS10550 (SAG1584)	-	1589092..1590225 (-)	1134	WP_000564846.1	ISAs1-like element IS1548 family transposase	-
SAG_RS10555 (SAG1585)	clpP	1590344..1590934 (-)	591	WP_000613483.1	ATP-dependent Clp protease proteolytic subunit	Regulator

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21550.52 Da
• Isoelectric Point: 4.5933

>NTDB_id=22284 SAG_RS10555 WP_000613483.1 1590344..1590934(-) (clpP) [Streptococcus agalactiae 2603V/R]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGQVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQSDMAIAAEHLLKTRHTLEKILADNSGQ
SIEKVHDDAERDRWMSAQETLDYGFIDAIMENNNLQ

Nucleotide

• Length: 591 bp

>NTDB_id=22284 SAG_RS10555 WP_000613483.1 1590344..1590934(-) (clpP) [Streptococcus agalactiae 2603V/R]
ATGATTCCAGTAGTTATTGAACAAACAAGTCGTGGTGAACGTTCTTATGATATTTACTCACGTCTTTTAAAAGATCGTAT
TATTATGTTGACAGGCCAAGTTGAGGATAATATGGCCAATAGTATCATTGCACAGTTATTGTTTCTCGATGCACAAGATA
ATACAAAGGATATTTACCTTTATGTCAATACACCAGGTGGTTCAGTATCGGCTGGACTTGCTATTGTGGACACCATGAAC
TTCATTAAATCGGACGTACAGACGATTGTTATGGGGATGGCTGCTTCGATGGGAACCATTATTGCTTCAAGTGGTGCTAA
AGGAAAACGTTTTATGTTACCGAATGCAGAATATATGATCCACCAACCAATGGGCGGAACAGGCGGAGGTACACAGCAAT
CTGATATGGCTATCGCTGCTGAGCATCTTTTAAAAACGCGTCATACTTTAGAAAAAATCTTAGCTGATAATTCTGGTCAA
TCTATTGAAAAAGTCCATGATGATGCAGAGCGTGATCGTTGGATGAGTGCTCAAGAAACACTTGATTATGGCTTTATTGA
TGCTATTATGGAAAATAATAATTTACAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus thermophilus LMG 18311	92.347	100	0.923
clpP	Streptococcus thermophilus LMD-9	92.347	100	0.923
clpP	Streptococcus pneumoniae Rx1	92.308	99.49	0.918
clpP	Streptococcus pneumoniae D39	92.308	99.49	0.918
clpP	Streptococcus pneumoniae R6	92.308	99.49	0.918
clpP	Streptococcus pneumoniae TIGR4	92.308	99.49	0.918
clpP	Streptococcus pyogenes JRS4	89.286	100	0.893
clpP	Streptococcus pyogenes MGAS315	89.286	100	0.893
clpP	Streptococcus mutans UA159	88.776	100	0.888
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.204	100	0.852
clpP	Lactococcus lactis subsp. cremoris KW2	84.694	100	0.847
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.031	98.469	0.571
clpP	Bacillus subtilis subsp. subtilis str. 168	57.895	96.939	0.561