Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | TLL_RS01760 | Genome accession | NC_004113 |
| Coordinates | 335897..336262 (+) | Length | 121 a.a. |
| NCBI ID | WP_011056201.1 | Uniprot ID | Q8DLY0 |
| Organism | Thermosynechococcus vestitus BP-1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 330897..341262
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TLL_RS01740 (tlr0342) | - | 331689..332231 (+) | 543 | WP_011056197.1 | TIGR04376 family protein | - |
| TLL_RS01745 (tlr0343) | aroA | 332279..333601 (+) | 1323 | WP_011056198.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| TLL_RS01750 (tlr0344) | - | 333914..334549 (+) | 636 | WP_011056199.1 | MerR family transcriptional regulator | - |
| TLL_RS01755 (tlr0345) | - | 334620..335810 (+) | 1191 | WP_011056200.1 | response regulator | - |
| TLL_RS01760 (tlr0346) | pilH | 335897..336262 (+) | 366 | WP_011056201.1 | response regulator transcription factor | Machinery gene |
| TLL_RS01765 (tlr0347) | - | 336268..336798 (+) | 531 | WP_011056202.1 | chemotaxis protein CheW | - |
| TLL_RS01770 (tlr0348) | - | 336997..340161 (+) | 3165 | WP_011056203.1 | methyl-accepting chemotaxis protein | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13552.66 Da Isoelectric Point: 4.5748
>NTDB_id=22231 TLL_RS01760 WP_011056201.1 335897..336262(+) (pilH) [Thermosynechococcus vestitus BP-1]
MTKVLVVEDSPPQREMISELLAKTGFEVTVATDGVEAMEQLQQSTPDVVVLDIVMPRMNGYEVCRQIKSDPRTQSIPVVM
CSSKGEEFDRYWGMKQGADAYITKPFDPKELVGTIKQLLRG
MTKVLVVEDSPPQREMISELLAKTGFEVTVATDGVEAMEQLQQSTPDVVVLDIVMPRMNGYEVCRQIKSDPRTQSIPVVM
CSSKGEEFDRYWGMKQGADAYITKPFDPKELVGTIKQLLRG
Nucleotide
Download Length: 366 bp
>NTDB_id=22231 TLL_RS01760 WP_011056201.1 335897..336262(+) (pilH) [Thermosynechococcus vestitus BP-1]
ATGACCAAAGTCTTAGTTGTCGAAGATAGTCCACCCCAGCGGGAAATGATTAGCGAATTGCTGGCAAAAACAGGCTTTGA
GGTGACGGTTGCCACCGATGGGGTGGAGGCAATGGAGCAATTGCAGCAGAGTACCCCAGATGTGGTTGTCCTCGACATTG
TCATGCCCCGTATGAATGGGTATGAAGTCTGCCGCCAAATTAAGTCCGACCCTCGCACCCAATCCATTCCCGTGGTTATG
TGTAGCTCCAAAGGTGAGGAGTTTGATCGCTATTGGGGCATGAAACAGGGGGCTGATGCGTACATTACCAAGCCCTTTGA
TCCCAAAGAACTCGTTGGCACCATCAAGCAACTCTTGCGAGGCTAA
ATGACCAAAGTCTTAGTTGTCGAAGATAGTCCACCCCAGCGGGAAATGATTAGCGAATTGCTGGCAAAAACAGGCTTTGA
GGTGACGGTTGCCACCGATGGGGTGGAGGCAATGGAGCAATTGCAGCAGAGTACCCCAGATGTGGTTGTCCTCGACATTG
TCATGCCCCGTATGAATGGGTATGAAGTCTGCCGCCAAATTAAGTCCGACCCTCGCACCCAATCCATTCCCGTGGTTATG
TGTAGCTCCAAAGGTGAGGAGTTTGATCGCTATTGGGGCATGAAACAGGGGGCTGATGCGTACATTACCAAGCCCTTTGA
TCCCAAAGAACTCGTTGGCACCATCAAGCAACTCTTGCGAGGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
73.554 |
100 |
0.736 |
| micA | Streptococcus pneumoniae Cp1015 |
41.667 |
99.174 |
0.413 |
| pilG | Acinetobacter baumannii strain A118 |
43.478 |
95.041 |
0.413 |
| pilL-C | Synechocystis sp. PCC 6803 |
40.336 |
98.347 |
0.397 |
| scnR | Streptococcus mutans UA159 |
39.496 |
98.347 |
0.388 |
| vicR | Streptococcus mutans UA159 |
37.5 |
99.174 |
0.372 |
| chpA | Acinetobacter baumannii strain A118 |
38.793 |
95.868 |
0.372 |