Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | BVZ63_RS01755 | Genome accession | NZ_CP020014 |
| Coordinates | 374795..375244 (-) | Length | 149 a.a. |
| NCBI ID | WP_005686726.1 | Uniprot ID | - |
| Organism | Haemophilus influenzae strain 11P6H | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 369795..380244
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BVZ63_RS01735 (BVZ63_361) | rho | 370176..371438 (+) | 1263 | WP_005648966.1 | transcription termination factor Rho | - |
| BVZ63_RS01740 (BVZ63_362) | pilD | 371492..372184 (-) | 693 | WP_005686720.1 | prepilin peptidase | Machinery gene |
| BVZ63_RS01745 (BVZ63_363) | pilC | 372181..373398 (-) | 1218 | WP_005686722.1 | type II secretion system F family protein | Machinery gene |
| BVZ63_RS01750 (BVZ63_364) | pilB | 373395..374798 (-) | 1404 | WP_105197617.1 | GspE/PulE family protein | Machinery gene |
| BVZ63_RS01755 (BVZ63_365) | pilA | 374795..375244 (-) | 450 | WP_005686726.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| BVZ63_RS01760 (BVZ63_366) | ampD | 375359..375919 (+) | 561 | WP_005648974.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| BVZ63_RS01765 (BVZ63_368) | corC | 376542..377441 (+) | 900 | WP_011961742.1 | CNNM family magnesium/cobalt transport protein CorC | - |
| BVZ63_RS01770 (BVZ63_369) | lnt | 377464..378993 (+) | 1530 | WP_074032781.1 | apolipoprotein N-acyltransferase | - |
| BVZ63_RS01775 (BVZ63_370) | rsmE | 379043..379780 (+) | 738 | WP_005686736.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 15542.90 Da Isoelectric Point: 8.4607
>NTDB_id=220041 BVZ63_RS01755 WP_005686726.1 374795..375244(-) (pilA) [Haemophilus influenzae strain 11P6H]
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTNEATKCTGGKNGIA
ADITTAKGYVKSVTTSNGAITVKGDGTLANMEYILQASGNAATGVTWTTTCKGTDASLFPANFCGSVTQ
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTNEATKCTGGKNGIA
ADITTAKGYVKSVTTSNGAITVKGDGTLANMEYILQASGNAATGVTWTTTCKGTDASLFPANFCGSVTQ
Nucleotide
Download Length: 450 bp
>NTDB_id=220041 BVZ63_RS01755 WP_005686726.1 374795..375244(-) (pilA) [Haemophilus influenzae strain 11P6H]
ATGAAACTAACAACACAGCAAACCTTGAAAAAAGGGTTTACATTAATAGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATCCCCTCTTATCAAAATTATACTAAAAAAGCAGCGGTATCTGAATTACTGCAAGCGTCAGCGC
CTTATAAGGCTGATGTGGAATTATGTGTATATAGCACAAATGAAGCAACAAAGTGTACGGGTGGAAAAAATGGTATTGCA
GCAGATATAACCACAGCAAAAGGCTATGTAAAATCAGTGACAACAAGCAACGGTGCAATAACAGTAAAAGGGGATGGCAC
ATTGGCAAATATGGAATATATTTTGCAAGCCAGTGGTAATGCTGCAACAGGTGTAACTTGGACAACAACTTGCAAAGGAA
CGGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTGTCACACAATGA
ATGAAACTAACAACACAGCAAACCTTGAAAAAAGGGTTTACATTAATAGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATCCCCTCTTATCAAAATTATACTAAAAAAGCAGCGGTATCTGAATTACTGCAAGCGTCAGCGC
CTTATAAGGCTGATGTGGAATTATGTGTATATAGCACAAATGAAGCAACAAAGTGTACGGGTGGAAAAAATGGTATTGCA
GCAGATATAACCACAGCAAAAGGCTATGTAAAATCAGTGACAACAAGCAACGGTGCAATAACAGTAAAAGGGGATGGCAC
ATTGGCAAATATGGAATATATTTTGCAAGCCAGTGGTAATGCTGCAACAGGTGTAACTTGGACAACAACTTGCAAAGGAA
CGGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTGTCACACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
97.987 |
100 |
0.98 |
| pilA | Haemophilus influenzae Rd KW20 |
91.275 |
100 |
0.913 |
| pilA | Glaesserella parasuis strain SC1401 |
54.362 |
100 |
0.544 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
42.446 |
93.289 |
0.396 |
| pilA2 | Legionella pneumophila str. Paris |
42.446 |
93.289 |
0.396 |
| pilA | Vibrio campbellii strain DS40M4 |
39.716 |
94.631 |
0.376 |