Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   CWQ21_RS06330 Genome accession   NZ_CP025028
Coordinates   1185091..1185273 (-) Length   60 a.a.
NCBI ID   WP_017647839.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain SGEHI2015-95     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1180091..1190273
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWQ21_RS06310 (CWQ21_06310) - 1181452..1182678 (-) 1227 WP_000934876.1 hypothetical protein -
  CWQ21_RS06315 (CWQ21_06315) - 1182668..1183858 (-) 1191 WP_001081540.1 AI-2E family transporter -
  CWQ21_RS06320 (CWQ21_06320) - 1183950..1184411 (-) 462 WP_000796045.1 NUDIX hydrolase -
  CWQ21_RS06325 (CWQ21_06325) mutX 1184401..1184883 (-) 483 WP_000163512.1 8-oxo-dGTP diphosphatase Machinery gene
  CWQ21_RS06330 (CWQ21_06330) prx 1185091..1185273 (-) 183 WP_017647839.1 hypothetical protein Regulator
  CWQ21_RS06335 (CWQ21_06335) - 1185396..1185605 (-) 210 WP_000424774.1 helix-turn-helix transcriptional regulator -
  CWQ21_RS11310 - 1185755..1185901 (+) 147 WP_001030869.1 hypothetical protein -
  CWQ21_RS06340 (CWQ21_06340) - 1186042..1186293 (+) 252 WP_000455662.1 hypothetical protein -
  CWQ21_RS06345 (CWQ21_06345) - 1186437..1187771 (-) 1335 WP_017647840.1 GH25 family lysozyme -
  CWQ21_RS06350 (CWQ21_06350) - 1187897..1188124 (-) 228 WP_000609111.1 phage holin -
  CWQ21_RS06355 (CWQ21_06355) - 1188117..1188419 (-) 303 WP_017647841.1 hypothetical protein -
  CWQ21_RS11525 - 1188428..1188556 (-) 129 WP_017647842.1 hypothetical protein -
  CWQ21_RS06360 (CWQ21_06360) - 1188579..1188971 (-) 393 WP_000889196.1 DUF1366 domain-containing protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6933.00 Da        Isoelectric Point: 4.2702

>NTDB_id=216417 CWQ21_RS06330 WP_017647839.1 1185091..1185273(-) (prx) [Streptococcus agalactiae strain SGEHI2015-95]
MLYIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLPGEPVRLWEVATEEKVEEVLMELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=216417 CWQ21_RS06330 WP_017647839.1 1185091..1185273(-) (prx) [Streptococcus agalactiae strain SGEHI2015-95]
ATGTTGTATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGTGCGTAAGAA
CGGAAAGATATTTGATTATGTGTTACCTGGTGAGCCTGTAAGATTGTGGGAAGTTGCGACAGAGGAAAAAGTGGAAGAAG
TGTTGATGGAATTAGATAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

73.333

100

0.733
  prx Streptococcus pyogenes MGAS8232

70

100

0.7
  prx Streptococcus pyogenes MGAS315

68.333

100

0.683
  prx Streptococcus pyogenes MGAS315

65

100

0.65
  prx Streptococcus pyogenes MGAS315

90.244

68.333

0.617
  prx Streptococcus pyogenes MGAS315

80.488

68.333

0.55
  prx Streptococcus pyogenes MGAS315

73.171

68.333

0.5