Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | BWR56_RS02940 | Genome accession | NZ_CP019562 |
| Coordinates | 616076..616666 (+) | Length | 196 a.a. |
| NCBI ID | WP_000613467.1 | Uniprot ID | A0AAX0N3L0 |
| Organism | Streptococcus oralis strain S.MIT/ORALIS-351 | ||
| Function | degradation of ComX; degradation of ComW (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 616076..625647 | 616076..616666 | within | 0 |
Gene organization within MGE regions
Location: 616076..625647
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BWR56_RS02940 (BWR56_0579) | clpP | 616076..616666 (+) | 591 | WP_000613467.1 | ATP-dependent Clp protease proteolytic subunit ClpP | Regulator |
| BWR56_RS02945 (BWR56_0580) | - | 616745..617014 (+) | 270 | WP_000462108.1 | YlbG family protein | - |
| BWR56_RS02950 (BWR56_0581) | - | 617103..618263 (+) | 1161 | WP_000726128.1 | ABC transporter substrate-binding protein | - |
| BWR56_RS02955 (BWR56_0582) | - | 618383..619252 (+) | 870 | WP_000941413.1 | branched-chain amino acid ABC transporter permease | - |
| BWR56_RS02960 (BWR56_0583) | - | 619256..620212 (+) | 957 | WP_076984443.1 | branched-chain amino acid ABC transporter permease | - |
| BWR56_RS02965 (BWR56_0584) | - | 620212..620976 (+) | 765 | WP_001186018.1 | ABC transporter ATP-binding protein | - |
| BWR56_RS02970 (BWR56_0585) | - | 620976..621686 (+) | 711 | WP_000062204.1 | ABC transporter ATP-binding protein | - |
| BWR56_RS02975 (BWR56_0586) | - | 622156..622812 (+) | 657 | WP_000268643.1 | CBS domain-containing protein | - |
| BWR56_RS02985 (BWR56_0587) | prfB | 622923..624018 (+) | 1096 | WP_155760976.1 | peptide chain release factor 2 | - |
| BWR56_RS02990 (BWR56_0588) | ftsE | 624036..624728 (+) | 693 | WP_000022275.1 | cell division ATP-binding protein FtsE | - |
| BWR56_RS02995 (BWR56_0589) | ftsX | 624721..625647 (+) | 927 | WP_000625556.1 | permease-like cell division protein FtsX | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21362.37 Da Isoelectric Point: 4.4829
>NTDB_id=216313 BWR56_RS02940 WP_000613467.1 616076..616666(+) (clpP) [Streptococcus oralis strain S.MIT/ORALIS-351]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRKTLEQILADNSGK
SVEQIHADAERDYWMSAQETLEYGFIDEIMANNSLS
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRKTLEQILADNSGK
SVEQIHADAERDYWMSAQETLEYGFIDEIMANNSLS
Nucleotide
Download Length: 591 bp
>NTDB_id=216313 BWR56_RS02940 WP_000613467.1 616076..616666(+) (clpP) [Streptococcus oralis strain S.MIT/ORALIS-351]
ATGATTCCTGTAGTTATTGAACAAACAAGCCGTGGAGAACGTTCCTATGACATTTACTCTCGTCTTCTGAAAGACCGCAT
CATCATGCTAACAGGTCCAGTTGAAGACAACATGGCCAACTCTGTTATCGCCCAATTACTTTTCTTGGATGCCCAAGACA
GCACAAAAGATATTTACCTTTATGTCAACACACCTGGAGGCTCTGTGTCAGCTGGTTTGGCAATCGTTGATACCATGAAC
TTTATCAAGGCAGATGTCCAAACAATCGTTATGGGGATGGCTGCATCCATGGGGACAGTCATCGCATCAAGTGGAGCAAA
AGGCAAACGTTTCATGCTTCCAAATGCAGAGTACATGATTCACCAACCAATGGGTGGTACAGGTGGTGGTACCCAACAGA
CAGATATGGCAATCGCTGCAGAGCACTTGCTTAAAACTCGTAAGACTTTGGAGCAAATCCTTGCAGATAACTCTGGTAAA
TCAGTCGAGCAAATTCATGCTGACGCTGAACGTGATTACTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTTATTGA
TGAAATCATGGCTAATAATTCTTTAAGCTAA
ATGATTCCTGTAGTTATTGAACAAACAAGCCGTGGAGAACGTTCCTATGACATTTACTCTCGTCTTCTGAAAGACCGCAT
CATCATGCTAACAGGTCCAGTTGAAGACAACATGGCCAACTCTGTTATCGCCCAATTACTTTTCTTGGATGCCCAAGACA
GCACAAAAGATATTTACCTTTATGTCAACACACCTGGAGGCTCTGTGTCAGCTGGTTTGGCAATCGTTGATACCATGAAC
TTTATCAAGGCAGATGTCCAAACAATCGTTATGGGGATGGCTGCATCCATGGGGACAGTCATCGCATCAAGTGGAGCAAA
AGGCAAACGTTTCATGCTTCCAAATGCAGAGTACATGATTCACCAACCAATGGGTGGTACAGGTGGTGGTACCCAACAGA
CAGATATGGCAATCGCTGCAGAGCACTTGCTTAAAACTCGTAAGACTTTGGAGCAAATCCTTGCAGATAACTCTGGTAAA
TCAGTCGAGCAAATTCATGCTGACGCTGAACGTGATTACTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTTATTGA
TGAAATCATGGCTAATAATTCTTTAAGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus pneumoniae Rx1 |
95.408 |
100 |
0.954 |
| clpP | Streptococcus pneumoniae R6 |
95.408 |
100 |
0.954 |
| clpP | Streptococcus pneumoniae TIGR4 |
95.408 |
100 |
0.954 |
| clpP | Streptococcus pneumoniae D39 |
95.408 |
100 |
0.954 |
| clpP | Streptococcus pyogenes JRS4 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pyogenes MGAS315 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus thermophilus LMD-9 |
91.282 |
99.49 |
0.908 |
| clpP | Streptococcus thermophilus LMG 18311 |
91.282 |
99.49 |
0.908 |
| clpP | Streptococcus mutans UA159 |
88.718 |
99.49 |
0.883 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
87.692 |
99.49 |
0.872 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
87.179 |
99.49 |
0.867 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.031 |
98.469 |
0.571 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
57.292 |
97.959 |
0.561 |