Detailed information NTG0216239

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: CWQ23_RS10570
• Genome accession: NZ_CP025026
• Coordinates: 2001567..2002676 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae strain SGEHI2015-113
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1996567..2007676

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CWQ23_RS10545 (CWQ23_10545)	-	1996939..1997778 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
CWQ23_RS10550 (CWQ23_10550)	pgsA	1997778..1998320 (-)	543	WP_000239224.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
CWQ23_RS10555 (CWQ23_10555)	-	1998443..1999726 (-)	1284	WP_000217765.1	pitrilysin family protein	-
CWQ23_RS10560 (CWQ23_10560)	-	1999728..2000972 (-)	1245	WP_000706190.1	pitrilysin family protein	-
CWQ23_RS10565 (CWQ23_10565)	yaaA	2001211..2001564 (+)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
CWQ23_RS10570 (CWQ23_10570)	recF	2001567..2002676 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
CWQ23_RS10575 (CWQ23_10575)	-	2002688..2003554 (-)	867	WP_000398683.1	GRP family sugar transporter	-
CWQ23_RS10580 (CWQ23_10580)	-	2003610..2004272 (-)	663	WP_001871057.1	helix-turn-helix transcriptional regulator	-
CWQ23_RS10585 (CWQ23_10585)	guaB	2004347..2005828 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
CWQ23_RS10590 (CWQ23_10590)	-	2005985..2006470 (-)	486	WP_001034427.1	arginine repressor	-
CWQ23_RS10595 (CWQ23_10595)	-	2006480..2007160 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=216239 CWQ23_RS10570 WP_000264870.1 2001567..2002676(+) (recF) [Streptococcus agalactiae strain SGEHI2015-113]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=216239 CWQ23_RS10570 WP_000264870.1 2001567..2002676(+) (recF) [Streptococcus agalactiae strain SGEHI2015-113]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447