Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   BZG42_RS09910 Genome accession   NZ_CP019557
Coordinates   2103088..2104263 (+) Length   391 a.a.
NCBI ID   WP_155995916.1    Uniprot ID   -
Organism   Streptococcus sp. DAT741     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2098088..2109263
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BZG42_RS09880 (BZG42_09990) - 2100074..2101330 (+) 1257 WP_159780156.1 ISL3 family transposase -
  BZG42_RS09900 (BZG42_10010) - 2101708..2102392 (-) 685 Protein_1907 YoaK family protein -
  BZG42_RS09905 (BZG42_10015) rlmH 2102417..2102896 (-) 480 WP_024531474.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  BZG42_RS09910 (BZG42_10020) htrA 2103088..2104263 (+) 1176 WP_155995916.1 trypsin-like peptidase domain-containing protein Regulator
  BZG42_RS09915 (BZG42_10025) spo0J 2104324..2105082 (+) 759 WP_155972277.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 391 a.a.        Molecular weight: 41613.04 Da        Isoelectric Point: 8.9096

>NTDB_id=216239 BZG42_RS09910 WP_155995916.1 2103088..2104263(+) (htrA) [Streptococcus sp. DAT741]
MKKYLKFTILFAVGLFGGLVGSFMTASFFQPQAQQQANSTITNVSKVQYNNETSTTKAVEKVQNAVVSVINYQKSANNSL
RSIFGNIDTPDEPVVAGEGSGVIYKKDDKYAYVVTNTHVINNAEKIDILLTSGEKVRGELVGSDTYSDIAVIRIPADKVT
TVAEFANSNTIKVGEPAIAIGSPLGSVYANTVTQGIISSLSRTITSQSEDGQTISTNAIQTDAAINPGNSGGPLINIKGQ
VVGINSSKKSTSRSGVAIEGMGFAIPANDVVAIINQIEKNGKVIRPALGFQLVNLTDLSTGQLEKAGLSDTKLTSGVVVV
STQKGLPADGKLETFDVITEINGEAVQNKSDLQSILYKHKIGDTIKVTYYRNNKKQTVDIKLTHSTDQLSQ

Nucleotide


Download         Length: 1176 bp        

>NTDB_id=216239 BZG42_RS09910 WP_155995916.1 2103088..2104263(+) (htrA) [Streptococcus sp. DAT741]
ATGAAAAAATATTTGAAATTTACTATTCTATTTGCTGTTGGTCTTTTTGGGGGGTTAGTTGGTTCTTTCATGACTGCCTC
TTTCTTTCAACCACAAGCACAACAACAGGCAAATTCTACTATTACAAATGTCAGCAAGGTGCAATACAATAATGAGACCT
CTACTACAAAAGCAGTAGAAAAGGTGCAAAATGCTGTTGTTTCAGTAATTAACTATCAAAAATCAGCAAACAATAGCCTA
CGCTCCATCTTCGGAAATATTGATACACCGGATGAACCTGTAGTAGCTGGAGAAGGTTCGGGTGTTATCTATAAAAAAGA
CGATAAATATGCCTACGTTGTTACCAATACGCATGTTATCAATAACGCAGAAAAAATAGATATTCTTCTAACTTCAGGAG
AAAAGGTCAGAGGAGAACTTGTTGGTTCTGACACTTATTCTGACATAGCTGTAATAAGGATTCCTGCTGATAAGGTCACT
ACTGTTGCCGAATTTGCTAACTCCAATACTATCAAGGTCGGTGAACCTGCTATCGCTATCGGTAGCCCACTTGGTAGTGT
CTATGCTAATACTGTTACACAAGGTATTATTTCTAGTTTGAGTAGAACTATCACCTCACAATCAGAAGATGGACAAACTA
TCTCTACCAACGCTATCCAAACAGATGCAGCCATTAACCCAGGTAATTCAGGTGGTCCACTGATAAATATTAAAGGACAA
GTTGTGGGGATCAATTCAAGTAAAAAGAGTACATCAAGATCCGGTGTTGCTATAGAAGGGATGGGCTTTGCTATTCCTGC
TAATGATGTAGTAGCTATTATCAATCAAATTGAGAAAAATGGTAAAGTTATCCGACCTGCTCTCGGTTTCCAACTAGTCA
ATTTGACAGATTTGTCAACTGGACAATTAGAAAAAGCTGGATTATCAGATACCAAATTAACATCTGGTGTTGTAGTTGTT
TCAACGCAGAAGGGGTTACCTGCTGATGGAAAACTTGAAACCTTTGATGTTATCACTGAGATTAACGGTGAAGCTGTTCA
AAATAAGAGCGATCTTCAAAGTATCCTCTACAAGCATAAAATTGGTGATACGATTAAGGTTACCTACTATCGTAACAATA
AAAAGCAAACAGTTGACATCAAGTTGACACATTCTACGGATCAACTCAGTCAATAA

Domains

Predicted by InterproScan.

Trypsin-like peptidase domain (Trypsin_2)

(99-244)

PDZ domain (PDZ_2)

(286-382)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

59.241

100

0.598
  htrA Streptococcus gordonii str. Challis substr. CH1

59.439

100

0.596
  htrA Streptococcus pneumoniae Rx1

56.041

99.488

0.558
  htrA Streptococcus pneumoniae D39

56.041

99.488

0.558
  htrA Streptococcus pneumoniae R6

56.041

99.488

0.558
  htrA Streptococcus pneumoniae TIGR4

56.041

99.488

0.558
  htrA Streptococcus mitis NCTC 12261

56.041

99.488

0.558

Multiple sequence alignment