Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BZG42_RS09915 Genome accession   NZ_CP019557
Coordinates   2104324..2105082 (+) Length   252 a.a.
NCBI ID   WP_155972277.1    Uniprot ID   -
Organism   Streptococcus sp. DAT741     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2099324..2110082
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BZG42_RS09880 (BZG42_09990) - 2100074..2101330 (+) 1257 WP_159780156.1 ISL3 family transposase -
  BZG42_RS09900 (BZG42_10010) - 2101708..2102392 (-) 685 Protein_1907 YoaK family protein -
  BZG42_RS09905 (BZG42_10015) rlmH 2102417..2102896 (-) 480 WP_024531474.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  BZG42_RS09910 (BZG42_10020) htrA 2103088..2104263 (+) 1176 WP_155995916.1 trypsin-like peptidase domain-containing protein Regulator
  BZG42_RS09915 (BZG42_10025) spo0J 2104324..2105082 (+) 759 WP_155972277.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 28797.13 Da        Isoelectric Point: 9.5374

>NTDB_id=216240 BZG42_RS09915 WP_155972277.1 2104324..2105082(+) (spo0J) [Streptococcus sp. DAT741]
MEELRTLNISEIHPNPYQPRVHFDETKLAELAQSIRENGLIQPIIVRKSSIIGYELLAGERRLRASQLAGLTEIPAVVKD
LTDDDLLRQAIIENLQRSDLNPIEEAQSYNNLINKGLTHDKIAQIMGKSRPYISNILRLLNLSTQAKKAVEEGKISQGHA
RQLLSLSEEKQAEWIQIILEKDLSVHALEKVLSNKKKKQVRQNNPFLKEQEVIISQHLGTTTKILQKKNGKGEIRIHFDN
LDEFERIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=216240 BZG42_RS09915 WP_155972277.1 2104324..2105082(+) (spo0J) [Streptococcus sp. DAT741]
ATGGAAGAATTACGTACCCTAAATATTTCAGAGATACATCCAAATCCCTATCAACCAAGAGTTCATTTTGATGAAACCAA
ACTGGCTGAATTAGCGCAATCTATCAGAGAAAATGGATTGATTCAACCGATTATTGTAAGAAAATCGTCCATTATTGGAT
ACGAATTATTGGCTGGAGAAAGAAGATTACGCGCCAGTCAATTAGCTGGTCTAACTGAAATACCGGCCGTTGTAAAAGAT
TTAACTGATGATGATTTACTCCGTCAGGCAATTATAGAAAACCTACAACGCTCAGATTTAAATCCTATTGAAGAGGCGCA
ATCTTATAATAATTTGATAAATAAAGGATTGACACATGATAAAATTGCCCAAATTATGGGAAAATCAAGACCTTATATCA
GTAATATATTGCGACTCTTAAACTTATCCACTCAAGCAAAAAAAGCTGTAGAAGAAGGAAAAATTTCACAGGGGCACGCG
CGACAATTGCTCTCACTTTCCGAGGAAAAACAAGCTGAATGGATTCAAATCATTTTAGAAAAAGATTTAAGTGTGCACGC
GCTTGAAAAAGTATTGTCCAATAAAAAGAAGAAACAAGTTAGACAGAACAATCCATTTTTAAAAGAACAAGAGGTCATTA
TTAGCCAGCATCTTGGAACAACTACAAAAATTCTCCAGAAAAAAAATGGGAAAGGGGAGATTCGGATTCATTTTGATAAT
CTAGATGAATTTGAAAGAATTATCAACAGCTTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-192)

ParB/Sulfiredoxin domain (ParB_N)

(7-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.545

100

0.548

Multiple sequence alignment