Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   CNQ51_RS02120 Genome accession   NZ_CP023371
Coordinates   429999..430631 (-) Length   210 a.a.
NCBI ID   WP_000242755.1    Uniprot ID   A0A1C4FZU4
Organism   Escherichia coli strain 1283     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 424999..435631
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CNQ51_RS02095 (CNQ51_02095) yhfG 425132..425299 (+) 168 WP_000736860.1 YhfG family protein -
  CNQ51_RS02100 (CNQ51_02100) fic 425289..425891 (+) 603 WP_001280624.1 putative adenosine monophosphate-protein transferase Fic -
  CNQ51_RS02105 (CNQ51_02105) pabA 425923..426486 (+) 564 WP_000601854.1 aminodeoxychorismate synthase component 2 -
  CNQ51_RS02110 (CNQ51_02110) argD 426572..427792 (+) 1221 WP_000963791.1 bifunctional acetylornithine/succinyldiaminopimelate transaminase -
  CNQ51_RS02115 (CNQ51_02115) yhfK 427858..429948 (-) 2091 WP_001447003.1 YccS/YhfK family putative transporter -
  CNQ51_RS02120 (CNQ51_02120) crp 429999..430631 (-) 633 WP_000242755.1 cAMP-activated global transcriptional regulator CRP Regulator
  CNQ51_RS02130 (CNQ51_02130) yhfA 430933..431337 (+) 405 WP_001148910.1 OsmC family protein -
  CNQ51_RS02135 (CNQ51_02135) prkB 431392..432261 (-) 870 WP_001274680.1 phosphoribulokinase -
  CNQ51_RS02140 (CNQ51_02140) yheU 432315..432533 (-) 219 WP_000907085.1 YheU family protein -
  CNQ51_RS02145 (CNQ51_02145) yheT 432527..433549 (-) 1023 WP_044067488.1 hydrolase -
  CNQ51_RS02150 (CNQ51_02150) yheS 433549..435462 (-) 1914 WP_000634798.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 210 a.a.        Molecular weight: 23640.43 Da        Isoelectric Point: 8.2710

>NTDB_id=206529 CNQ51_RS02120 WP_000242755.1 429999..430631(-) (crp) [Escherichia coli strain 1283]
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEG
QERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTH
PDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR

Nucleotide


Download         Length: 633 bp        

>NTDB_id=206529 CNQ51_RS02120 WP_000242755.1 429999..430631(-) (crp) [Escherichia coli strain 1283]
ATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAA
GAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAG
ACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGGGC
CAGGAACGTAGCGCATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGAT
TCAGGTAAACCCGGACATTCTGATGCGTCTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCA
ACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAC
CCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATCGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCAT
TCTGAAGATGCTTGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAA

Domains

Predicted by InterProScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(23-109)

Crp-like helix-turn-helix domain (HTH_Crp_2)

(142-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1C4FZU4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Vibrio cholerae strain A1552

95.714

100

0.957
  crp Haemophilus influenzae Rd KW20

77.941

97.143

0.757
  crp Acinetobacter baumannii D1279779

47.343

98.571

0.467

Multiple sequence alignment