Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | BRW62_RS11305 | Genome accession | NZ_CP018092 |
| Coordinates | 2324123..2324488 (+) | Length | 121 a.a. |
| NCBI ID | WP_099799508.1 | Uniprot ID | A0A2D2Q3V4 |
| Organism | Parathermosynechococcus lividus PCC 6715 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2319123..2329488
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BRW62_RS11290 (BRW62_10930) | aroA | 2320423..2321745 (+) | 1323 | WP_099799506.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| BRW62_RS15370 | - | 2322077..2322310 (+) | 234 | Protein_2284 | MerR family transcriptional regulator | - |
| BRW62_RS14145 | - | 2322463..2322708 (+) | 246 | WP_227517391.1 | hypothetical protein | - |
| BRW62_RS11300 (BRW62_10935) | - | 2322739..2323920 (+) | 1182 | WP_099799507.1 | response regulator | - |
| BRW62_RS11305 (BRW62_10940) | pilH | 2324123..2324488 (+) | 366 | WP_099799508.1 | response regulator transcription factor | Machinery gene |
| BRW62_RS11310 (BRW62_10945) | - | 2324494..2325024 (+) | 531 | WP_099799509.1 | chemotaxis protein CheW | - |
| BRW62_RS11315 (BRW62_10950) | - | 2325163..2328369 (+) | 3207 | WP_099799510.1 | methyl-accepting chemotaxis protein | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13560.69 Da Isoelectric Point: 4.5748
>NTDB_id=205703 BRW62_RS11305 WP_099799508.1 2324123..2324488(+) (pilH) [Parathermosynechococcus lividus PCC 6715]
MSKVLVVEDSPPQREMISELLAKTGFEVTIASDGVEAIEQLQNFTPDLVVLDIVMPRMNGYEVCRQIKADPRTQTVPVVI
CSSKGEEFDRYWGMKQGADAYITKPFDPKELIGTIKQLLRG
MSKVLVVEDSPPQREMISELLAKTGFEVTIASDGVEAIEQLQNFTPDLVVLDIVMPRMNGYEVCRQIKADPRTQTVPVVI
CSSKGEEFDRYWGMKQGADAYITKPFDPKELIGTIKQLLRG
Nucleotide
Download Length: 366 bp
>NTDB_id=205703 BRW62_RS11305 WP_099799508.1 2324123..2324488(+) (pilH) [Parathermosynechococcus lividus PCC 6715]
ATGAGTAAAGTCTTAGTTGTTGAAGATAGCCCCCCACAGCGGGAGATGATTAGCGAGCTACTAGCAAAGACAGGCTTCGA
AGTCACAATTGCCAGCGATGGTGTCGAAGCAATTGAACAGCTCCAGAACTTCACCCCTGATCTTGTGGTTCTAGATATTG
TCATGCCACGCATGAATGGCTATGAAGTCTGTCGCCAAATTAAGGCAGATCCGCGCACTCAAACGGTTCCCGTTGTCATT
TGTAGTTCTAAAGGCGAAGAGTTTGATCGCTACTGGGGCATGAAACAAGGCGCTGATGCGTATATCACAAAACCCTTCGA
CCCCAAAGAACTGATTGGTACCATCAAACAACTATTACGAGGCTAG
ATGAGTAAAGTCTTAGTTGTTGAAGATAGCCCCCCACAGCGGGAGATGATTAGCGAGCTACTAGCAAAGACAGGCTTCGA
AGTCACAATTGCCAGCGATGGTGTCGAAGCAATTGAACAGCTCCAGAACTTCACCCCTGATCTTGTGGTTCTAGATATTG
TCATGCCACGCATGAATGGCTATGAAGTCTGTCGCCAAATTAAGGCAGATCCGCGCACTCAAACGGTTCCCGTTGTCATT
TGTAGTTCTAAAGGCGAAGAGTTTGATCGCTACTGGGGCATGAAACAAGGCGCTGATGCGTATATCACAAAACCCTTCGA
CCCCAAAGAACTGATTGGTACCATCAAACAACTATTACGAGGCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
75.207 |
100 |
0.752 |
| micA | Streptococcus pneumoniae Cp1015 |
40.833 |
99.174 |
0.405 |
| pilG | Acinetobacter baumannii strain A118 |
41.739 |
95.041 |
0.397 |
| pilL-C | Synechocystis sp. PCC 6803 |
40.336 |
98.347 |
0.397 |
| chpA | Acinetobacter baumannii strain A118 |
40.517 |
95.868 |
0.388 |
| scnR | Streptococcus mutans UA159 |
41.818 |
90.909 |
0.38 |
| vicR | Streptococcus mutans UA159 |
38.333 |
99.174 |
0.38 |