Detailed information NTG0020363

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: SMA_1669
• Genome accession: HE613569
• Coordinates: 1623242..1623832 (-)
• Length: 196 a.a.
• NCBI ID: CCF02960.1
• Uniprot ID: -
• Organism: Streptococcus macedonicus ACA-DC 198
• Function: degradation of ComX; degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 1618242..1628832

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMA_1664	livG	1618508..1619272 (-)	765	CCF02955.1	Branched-chain amino acid transport ATP-binding protein LivG	-
SMA_1665	livM	1619272..1620225 (-)	954	CCF02956.1	Branched-chain amino acid transport system permease protein LivM	-
SMA_1666	livH	1620229..1621113 (-)	885	CCF02957.1	High-affinity branched-chain amino acid transport system permease protein LivH	-
SMA_1667	livJ	1621165..1622346 (-)	1182	CCF02958.1	Branched-chain amino acid ABC transporter, amino acid-binding protein	-
SMA_1668	-	1622459..1623145 (-)	687	CCF02959.1	Hypothetical protein	-
SMA_1669	clpP	1623242..1623832 (-)	591	CCF02960.1	ATP-dependent Clp protease proteolytic subunit	Regulator
SMA_1670	-	1623964..1624857 (-)	894	CCF02961.1	Permease of the drug/metabolite transporter (DMT) superfamily	-
SMA_1671	-	1624970..1625839 (+)	870	CCF02962.1	LysR family transcriptional regulator	-
SMA_1672	upp	1625905..1626534 (-)	630	CCF02963.1	Uracil phosphoribosyltransferase	-
SMA_1673	-	1626693..1627856 (-)	1164	CCF02964.1	Aspartate aminotransferase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21548.54 Da
• Isoelectric Point: 4.4901

>NTDB_id=20363 SMA_1669 CCF02960.1 1623242..1623832(-) (clpP) [Streptococcus macedonicus ACA-DC 198]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKIRHNLEQILANNSGQ
TFEKVHADAERDNWMSAQETLEYGFIDEIMVNNELN

Nucleotide

• Length: 591 bp

>NTDB_id=20363 SMA_1669 CCF02960.1 1623242..1623832(-) (clpP) [Streptococcus macedonicus ACA-DC 198]
ATGATTCCCGTAGTTATTGAACAAACGAGCCGTGGTGAACGCTCATATGATATTTATTCACGCCTTTTGAAAGACCGTAT
TATCATGTTGACTGGACCAGTTGAAGATAATATGGCTAACTCTATCATTGCCCAATTGTTGTTCCTTGATGCACAAGATA
ACACTAAAGATATTTACCTTTATGTTAATACTCCTGGTGGTTCAGTATCAGCAGGACTTGCCATTGTTGATACAATGAAT
TTCATTAAATCAGATGTTCAAACAATTGTTATGGGTATGGCAGCTTCAATGGGAACTGTTATTGCGTCATCAGGTGCAAA
AGGTAAACGTTTCATGTTGCCAAATGCTGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGCGGTACACAACAAA
CAGATATGGCAATTGCTGCCGAACACCTTTTGAAAATACGTCACAACTTGGAACAAATTTTGGCTAACAACTCTGGTCAA
ACATTTGAAAAAGTTCACGCTGACGCCGAACGTGATAACTGGATGAGTGCACAAGAAACCCTCGAATACGGCTTCATCGA
CGAAATCATGGTAAACAACGAATTAAACTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pneumoniae Rx1	93.878	100	0.939
clpP	Streptococcus pneumoniae D39	93.878	100	0.939
clpP	Streptococcus pneumoniae R6	93.878	100	0.939
clpP	Streptococcus pneumoniae TIGR4	93.878	100	0.939
clpP	Streptococcus thermophilus LMG 18311	94.359	99.49	0.939
clpP	Streptococcus thermophilus LMD-9	94.359	99.49	0.939
clpP	Streptococcus pyogenes JRS4	90.306	100	0.903
clpP	Streptococcus pyogenes MGAS315	90.306	100	0.903
clpP	Streptococcus mutans UA159	87.245	100	0.872
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.204	100	0.852
clpP	Lactococcus lactis subsp. cremoris KW2	84.694	100	0.847
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.474	96.939	0.577
clpP	Bacillus subtilis subsp. subtilis str. 168	58.247	98.98	0.577