Detailed information NTG0202924

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: BK049_RS11290
• Genome accession: NZ_CP017786
• Coordinates: 2242191..2242787 (-)
• Length: 198 a.a.
• NCBI ID: WP_008361979.1
• Uniprot ID: -
• Organism: Bacillus xiamenensis strain VV3
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2237191..2247787

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BK049_RS11260 (BK049_11260)	-	2237592..2237849 (+)	258	WP_008348124.1	HPr family phosphocarrier protein	-
BK049_RS11265 (BK049_11265)	-	2237890..2238633 (+)	744	WP_071168525.1	arylamine N-acetyltransferase	-
BK049_RS11270 (BK049_11270)	-	2238684..2239172 (-)	489	WP_008361076.1	ribonuclease	-
BK049_RS11280 (BK049_11280)	-	2239549..2240526 (-)	978	WP_071168526.1	D-glycerate dehydrogenase	-
BK049_RS11285 (BK049_11285)	-	2240982..2241590 (+)	609	Protein_2197	solute carrier family 23 protein	-
BK049_RS18905	-	2241942..2242073 (+)	132	Protein_2198	TIGR00730 family Rossman fold protein	-
BK049_RS11290 (BK049_11290)	clpP	2242191..2242787 (-)	597	WP_008361979.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
BK049_RS11295 (BK049_11295)	-	2243015..2243323 (+)	309	WP_008361976.1	TM2 domain-containing protein	-
BK049_RS11305 (BK049_11305)	-	2243818..2244282 (+)	465	WP_008361975.1	DinB family protein	-
BK049_RS19980	-	2244417..2244545 (+)	129	WP_268557951.1	hypothetical protein	-
BK049_RS11310 (BK049_11310)	-	2244711..2245880 (+)	1170	WP_083381117.1	macrolide family glycosyltransferase	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21848.99 Da
• Isoelectric Point: 4.6076

>NTDB_id=202924 BK049_RS11290 WP_008361979.1 2242191..2242787(-) (clpP) [Bacillus xiamenensis strain VV3]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLSERTGQ
PIEVIERDTDRDNFKTAEEALEYGLIDKVLTRNTDEQK

Nucleotide

• Length: 597 bp

>NTDB_id=202924 BK049_RS11290 WP_008361979.1 2242191..2242787(-) (clpP) [Bacillus xiamenensis strain VV3]
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCCTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCAATCGATGACAATGTTGCCAACTCCATCGTGTCACAGCTTCTTTTCTTAGAAGCCG
AAGATCCAGAAAAAGATATTTCTATCTACATTAACAGCCCTGGAGGTTCGATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAGCCAAAGGTATCAACTATTTGTATTGGGATGGCTGCATCAATGGGTGCGTTCCTGCTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCCCTTCCAAATAGTGAAGTGATGATTCACCAACCACTAGGCGGTGCCCAAGGTCAAGCAA
CAGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTTCTGAACGTACTGGTCAG
CCAATTGAAGTGATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCTCTTGAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATACAGACGAACAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	92.893	99.495	0.924
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.539	96.465	0.652
clpP	Streptococcus thermophilus LMG 18311	58.549	97.475	0.571
clpP	Streptococcus thermophilus LMD-9	58.549	97.475	0.571
clpP	Lactococcus lactis subsp. cremoris KW2	56.186	97.98	0.551
clpP	Streptococcus pneumoniae D39	55.67	97.98	0.545
clpP	Streptococcus pneumoniae Rx1	55.67	97.98	0.545
clpP	Streptococcus pneumoniae R6	55.67	97.98	0.545
clpP	Streptococcus pneumoniae TIGR4	55.67	97.98	0.545
clpP	Streptococcus mutans UA159	55.155	97.98	0.54
clpP	Streptococcus pyogenes JRS4	54.922	97.475	0.535
clpP	Streptococcus pyogenes MGAS315	54.922	97.475	0.535
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	54.124	97.98	0.53