Detailed information NTG0020069

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: SDD27957_06930
• Genome accession: CM001076
• Coordinates: 1354196..1355155 (-)
• Length: 319 a.a.
• NCBI ID: EFY03018.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1349196..1360155

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SDD27957_06910	-	1350356..1350976 (-)	621	EFY03014.1	hydrolase, haloacid dehalogenase-like family protein	-
SDD27957_06915	-	1350976..1351518 (-)	543	EFY03015.1	acetyltransferase (GNAT) family protein	-
SDD27957_06920	-	1351641..1352195 (-)	555	EFY03016.1	putative chromate reductase	-
SDD27957_06925	pepF	1352383..1354185 (-)	1803	EFY03017.1	putative oligopeptidase	Regulator
SDD27957_06930	coiA	1354196..1355155 (-)	960	EFY03018.1	putative competence protein/transcription factor	Machinery gene
SDD27957_06935	-	1355345..1356169 (-)	825	EFY03019.1	transposase	-
SDD27957_06940	-	1356202..1356495 (-)	294	EFY03020.1	transposase	-
SDD27957_06945	-	1356603..1357763 (-)	1161	EFY03021.1	major facilitator family protein	-
SDD27957_06950	-	1357855..1358571 (-)	717	EFY03022.1	Putative 16S pseudouridylate synthetase	-
SDD27957_06955	-	1358675..1359388 (-)	714	EFY03023.1	glucosamine-6-phosphate isomerase	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 37434.71 Da
• Isoelectric Point: 10.1318

>NTDB_id=20069 SDD27957_06930 EFY03018.1 1354196..1355155(-) (coiA) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
MRVLTALTNENQVISLLAQPNPQKQPFRCPACGSPVRLRQGKIIRPHFAHITLANCHFQTENESQEHLHLKAKLYTSLVK
TEKVCVEKYLPELQQFPDLWVNDKLALEIQCSPLPIERLVARTQAYQKNGYEVRWLLGKKLWLKNRLTAFQKQCLYFSSS
LGFHLWELDTAAHLLRLKYLIHEDLFGKVSYLTKTISLDNNIMESLRIPYHQRKLCSYQKPMAKSLSIPIQRALLAKHSK
WLHRQERAYLAGYNLLMLPVEAFYPQWRPVQSATGFCQIKENLHDYDKSFKAYYKKEGNKKVQTLFSPQYYVKIVSNRK

Nucleotide

• Length: 960 bp

>NTDB_id=20069 SDD27957_06930 EFY03018.1 1354196..1355155(-) (coiA) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
TTGAGAGTATTAACAGCTTTAACCAATGAGAATCAGGTGATTTCTTTGCTAGCACAGCCTAATCCTCAGAAGCAACCATT
TCGTTGTCCAGCTTGTGGATCCCCTGTTCGCTTGCGTCAGGGAAAAATTATACGCCCTCATTTTGCACACATCACATTAG
CTAATTGTCATTTTCAAACAGAAAATGAGTCCCAAGAACATTTGCATTTGAAAGCAAAATTATATACAAGCCTGGTAAAG
ACAGAAAAGGTTTGTGTGGAAAAGTATCTTCCTGAGTTACAACAATTTCCAGACCTTTGGGTGAATGATAAATTAGCCTT
AGAAATTCAGTGCAGCCCTTTACCAATTGAGCGTTTGGTGGCACGTACACAAGCCTATCAGAAAAATGGTTACGAGGTTC
GTTGGCTGTTGGGAAAGAAACTTTGGCTTAAAAATCGTTTAACGGCCTTCCAAAAACAATGTCTTTACTTTTCGTCTAGT
TTAGGCTTTCATTTGTGGGAGTTGGATACAGCTGCACATCTGTTACGTCTAAAATACTTAATTCATGAAGATTTATTTGG
CAAAGTGAGTTACCTAACCAAAACCATTTCTTTGGATAACAATATCATGGAAAGTTTGCGGATTCCTTATCACCAAAGGA
AGCTCTGTTCTTACCAAAAACCTATGGCCAAATCTCTTTCGATACCCATTCAAAGGGCTTTATTAGCGAAGCATTCTAAA
TGGTTACATCGTCAGGAAAGAGCCTATTTAGCTGGCTATAATTTACTCATGTTGCCAGTAGAGGCCTTCTATCCTCAATG
GCGCCCCGTACAGTCGGCTACTGGTTTTTGTCAAATCAAAGAGAATCTCCATGATTATGATAAGAGTTTTAAAGCTTATT
ACAAAAAAGAAGGGAATAAAAAGGTGCAAACGCTTTTTTCGCCTCAATATTATGTTAAAATAGTTAGTAATAGAAAATGA

Domains

Predicted by InterProScan.

• Competence protein CoiA-like family (CoiA_nuc) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	43.226	97.179	0.42
coiA	Streptococcus pneumoniae Rx1	41.935	97.179	0.408
coiA	Streptococcus pneumoniae D39	41.935	97.179	0.408
coiA	Streptococcus pneumoniae R6	41.935	97.179	0.408
coiA	Streptococcus pneumoniae TIGR4	41.935	97.179	0.408
coiA	Lactococcus lactis subsp. cremoris KW2	38.344	100	0.392