Detailed information
Bioinformatically predicted
Overview
| Name | scnR | Type | Regulator |
| Locus tag | SDD27957_04385 | Genome accession | CM001076 |
| Coordinates | 859870..860568 (-) | Length | 232 a.a. |
| NCBI ID | EFY02530.1 | Uniprot ID | - |
| Organism | Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957 | ||
| Function | regulate comX expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 854870..865568
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SDD27957_04365 | - | 855354..855947 (+) | 594 | EFY02526.1 | hypothetical protein | - |
| SDD27957_04370 | - | 855944..856786 (+) | 843 | EFY02527.1 | hypothetical protein | - |
| SDD27957_04375 | - | 856793..858412 (+) | 1620 | EFY02528.1 | hypothetical protein | - |
| SDD27957_04380 | - | 858492..859853 (-) | 1362 | EFY02529.1 | sensor histidine kinase | - |
| SDD27957_04385 | scnR | 859870..860568 (-) | 699 | EFY02530.1 | response regulator protein | Regulator |
| SDD27957_04390 | - | 860781..860936 (+) | 156 | EFY02531.1 | hypothetical protein | - |
| SDD27957_04395 | - | 860965..861120 (+) | 156 | EFY02532.1 | hypothetical protein | - |
| SDD27957_04400 | - | 861586..861747 (+) | 162 | EFY02533.1 | hypothetical protein | - |
| SDD27957_04405 | - | 861767..864553 (+) | 2787 | EFY02534.1 | NukM | - |
Sequence
Protein
Download Length: 232 a.a. Molecular weight: 26038.13 Da Isoelectric Point: 8.3981
>NTDB_id=20051 SDD27957_04385 EFY02530.1 859870..860568(-) (scnR) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
MNFETQLLNKRILIIDDDVSLSQSIKEVLVNRGFKNISNAYSISEGIDIFSVSKIDFIILDVMLPDGEGYLLAKYVRKTS
DIPILFLTAKNNPDDEVKGLGSGGDDFVTKPFLPKTLIYRIIALLRRAYKNESELITMSSCTIDLNNASVNKNGNQLSLT
PTEIQILRKLYSNKNYIVSTKTICDTIWGLDSSGYEKSLMVHIRNIREKIESSPSKPDHLITVKGLGYKLVV
MNFETQLLNKRILIIDDDVSLSQSIKEVLVNRGFKNISNAYSISEGIDIFSVSKIDFIILDVMLPDGEGYLLAKYVRKTS
DIPILFLTAKNNPDDEVKGLGSGGDDFVTKPFLPKTLIYRIIALLRRAYKNESELITMSSCTIDLNNASVNKNGNQLSLT
PTEIQILRKLYSNKNYIVSTKTICDTIWGLDSSGYEKSLMVHIRNIREKIESSPSKPDHLITVKGLGYKLVV
Nucleotide
Download Length: 699 bp
>NTDB_id=20051 SDD27957_04385 EFY02530.1 859870..860568(-) (scnR) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
ATGAATTTTGAAACACAGTTATTAAACAAACGGATATTAATAATAGATGATGATGTCTCACTTAGTCAATCTATTAAAGA
GGTATTAGTCAATAGAGGATTTAAAAATATTAGTAACGCTTATAGTATTAGCGAGGGCATTGATATTTTTTCTGTATCCA
AGATTGATTTCATCATATTAGATGTAATGTTACCTGATGGTGAGGGGTATTTACTTGCCAAATATGTTAGAAAAACTTCT
GATATTCCAATATTATTTTTAACAGCAAAAAATAATCCTGATGATGAAGTTAAAGGCCTTGGATCAGGTGGTGATGATTT
TGTCACTAAACCATTTCTCCCGAAAACCTTAATATATCGTATCATTGCTCTATTAAGAAGAGCATACAAAAATGAATCCG
AATTAATTACAATGTCTTCTTGTACCATTGATTTAAATAATGCAAGTGTAAATAAAAATGGAAATCAACTTTCACTAACT
CCTACTGAAATACAGATACTACGAAAACTATACAGTAATAAGAACTACATTGTTTCAACAAAAACAATTTGTGATACTAT
TTGGGGACTTGATAGTTCTGGATATGAAAAGTCATTAATGGTACACATTCGAAATATAAGAGAAAAAATAGAATCAAGCC
CTTCTAAACCGGATCATCTTATTACCGTTAAAGGTCTTGGATATAAGCTTGTTGTCTGA
ATGAATTTTGAAACACAGTTATTAAACAAACGGATATTAATAATAGATGATGATGTCTCACTTAGTCAATCTATTAAAGA
GGTATTAGTCAATAGAGGATTTAAAAATATTAGTAACGCTTATAGTATTAGCGAGGGCATTGATATTTTTTCTGTATCCA
AGATTGATTTCATCATATTAGATGTAATGTTACCTGATGGTGAGGGGTATTTACTTGCCAAATATGTTAGAAAAACTTCT
GATATTCCAATATTATTTTTAACAGCAAAAAATAATCCTGATGATGAAGTTAAAGGCCTTGGATCAGGTGGTGATGATTT
TGTCACTAAACCATTTCTCCCGAAAACCTTAATATATCGTATCATTGCTCTATTAAGAAGAGCATACAAAAATGAATCCG
AATTAATTACAATGTCTTCTTGTACCATTGATTTAAATAATGCAAGTGTAAATAAAAATGGAAATCAACTTTCACTAACT
CCTACTGAAATACAGATACTACGAAAACTATACAGTAATAAGAACTACATTGTTTCAACAAAAACAATTTGTGATACTAT
TTGGGGACTTGATAGTTCTGGATATGAAAAGTCATTAATGGTACACATTCGAAATATAAGAGAAAAAATAGAATCAAGCC
CTTCTAAACCGGATCATCTTATTACCGTTAAAGGTCTTGGATATAAGCTTGTTGTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| scnR | Streptococcus mutans UA159 |
40.948 |
100 |
0.409 |
| vicR | Streptococcus mutans UA159 |
36.681 |
98.707 |
0.362 |