Detailed information NTG0020027

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: SDD27957_02110
• Genome accession: CM001076
• Coordinates: 425487..426077 (+)
• Length: 196 a.a.
• NCBI ID: EFY02106.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 420487..431077

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SDD27957_02095	-	421270..422454 (-)	1185	EFY02103.1	UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase	-
SDD27957_02100	-	422802..424436 (+)	1635	EFY02104.1	export protein for polysaccharides and teichoic acids	-
SDD27957_02105	upp	424634..425263 (+)	630	EFY02105.1	uracil phosphoribosyltransferase	-
SDD27957_02110	clpP	425487..426077 (+)	591	EFY02106.1	ATP-dependent Clp protease proteolytic subunit	Regulator
SDD27957_02115	-	426474..426770 (+)	297	EFY02107.1	hypothetical protein	-
SDD27957_02120	-	426845..427315 (+)	471	EFY02108.1	hypothetical protein	-
SDD27957_02125	-	427291..427581 (+)	291	EFY02109.1	hypothetical protein	-
SDD27957_02130	-	427830..429002 (+)	1173	EFY02110.1	branched-chain amino acid ABC transporter, amino acid-binding protein	-
SDD27957_02135	-	429195..430064 (+)	870	EFY02111.1	branched-chain amino acid transport system permease protein	-
SDD27957_02140	-	430068..431021 (+)	954	EFY02112.1	branched-chain amino acid transport system permease protein	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21648.88 Da
• Isoelectric Point: 5.2834

>NTDB_id=20027 SDD27957_02110 EFY02106.1 425487..426077(+) (clpP) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK

Nucleotide

• Length: 591 bp

>NTDB_id=20027 SDD27957_02110 EFY02106.1 425487..426077(+) (clpP) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
ATGATTCCTGTTGTTATTGAACAAACTAGTCGTGGTGAACGTTCTTATGACATTTACTCGCGCTTATTAAAAGACCGTAT
TATCATGTTGACAGGGCCTGTTGAGGACAACATGGCAAACTCTGTCATTGCGCAGCTTTTATTCCTTGATGCTCAGGACA
ATACGAAAGACATTTATTTGTATGTCAACACACCTGGTGGTTCTGTTTCAGCGGGTTTGGCTATTGTCGACACCATGAAC
TTTATCAAAGCTGATGTCCAAACCATTGTTATGGGGATGGCCGCTTCTATGGGGACTGTCATTGCTTCATCAGGTACTAA
GGGTAAACGCTTCATGTTACCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACAGGTGGTGGTACCCAACAAA
CAGATATGGCCATTGCTGCAGAGCACCTCTTAAAAACTCGTCACCGTTTAGAAAAAATCTTAGCACAAAATGCTGGAAAG
ACCATTAAACAAATTCATAAAGATGCTGAACGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA
TGAAATCATGGAAAATAACGAATTAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	100	100	1
clpP	Streptococcus pyogenes JRS4	100	100	1
clpP	Streptococcus mutans UA159	90.816	100	0.908
clpP	Streptococcus pneumoniae Rx1	90.769	99.49	0.903
clpP	Streptococcus pneumoniae D39	90.769	99.49	0.903
clpP	Streptococcus pneumoniae R6	90.769	99.49	0.903
clpP	Streptococcus pneumoniae TIGR4	90.769	99.49	0.903
clpP	Streptococcus thermophilus LMG 18311	89.796	100	0.898
clpP	Streptococcus thermophilus LMD-9	89.796	100	0.898
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	86.224	100	0.862
clpP	Lactococcus lactis subsp. cremoris KW2	85.714	100	0.857
clpP	Bacillus subtilis subsp. subtilis str. 168	57.143	100	0.571
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.995	98.469	0.561