Detailed information NTG0198357

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: BIZ52_RS05010
• Genome accession: NZ_CP017457
• Coordinates: 1105500..1106564 (+)
• Length: 354 a.a.
• NCBI ID: WP_027227633.1
• Uniprot ID: -
• Organism: Legionella pneumophila subsp. fraseri strain Detroit-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1100500..1111564

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BIZ52_RS05000 (BIZ52_04930)	-	1101539..1103923 (-)	2385	WP_027227631.1	penicillin-binding protein 1A	-
BIZ52_RS05005 (BIZ52_04935)	ravI	1104074..1105081 (-)	1008	WP_027227632.1	Dot/Icm T4SS effector RavI	-
BIZ52_RS05010 (BIZ52_04940)	pilM	1105500..1106564 (+)	1065	WP_027227633.1	type IV pilus assembly protein PilM	Machinery gene
BIZ52_RS05015 (BIZ52_04945)	pilN	1106568..1107116 (+)	549	WP_027227634.1	PilN domain-containing protein	Machinery gene
BIZ52_RS05020 (BIZ52_04950)	pilO	1107130..1107729 (+)	600	WP_027221266.1	type 4a pilus biogenesis protein PilO	Machinery gene
BIZ52_RS05025 (BIZ52_04955)	pilP	1107726..1108310 (+)	585	WP_027227635.1	pilus assembly protein PilP	Machinery gene
BIZ52_RS05030 (BIZ52_04960)	pilQ	1108314..1110410 (+)	2097	WP_027227636.1	type IV pilus secretin PilQ	Machinery gene
BIZ52_RS05035 (BIZ52_04965)	aroK	1110856..1111383 (+)	528	WP_010946667.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38826.80 Da
• Isoelectric Point: 5.0331

>NTDB_id=198357 BIZ52_RS05010 WP_027227633.1 1105500..1106564(+) (pilM) [Legionella pneumophila subsp. fraseri strain Detroit-1]
MLKLLKPKHRSILGIDISSSAVKILEISGSGEQVCVEGYGREEIPASALEGNMIKDVDVVANCIKKLVERLKFTSKNVAL
AVPDSAVISKVVQINEGLTDQEMEELVVIEADKYIPYPIDEINLDFEVLGHSAKNSALLDVLIVASRAENVNSRVEAAHR
AGLEPKIVDVESYAVERSVQQIAQELPASGQDKIIAIVDIGTNYTHLFALHGMRLIFSREEKFGGMQLVEAIAEHYHMNL
EQAIALKNQGKLPEDYESAVLEPFKDMILLQIKRTLQFFYSTSQHGFVDHILLAGGMARQPGLAALIQEQLGVTTTVANP
LSYMSFGKKVNLDAINNDAPTLMVACGLALRHVE

Nucleotide

• Length: 1065 bp

>NTDB_id=198357 BIZ52_RS05010 WP_027227633.1 1105500..1106564(+) (pilM) [Legionella pneumophila subsp. fraseri strain Detroit-1]
GTGCTCAAATTGCTTAAACCTAAGCATCGTTCAATTCTTGGCATTGACATTAGTTCTTCAGCAGTGAAAATTTTGGAAAT
TTCAGGTTCCGGAGAGCAAGTTTGTGTTGAAGGATATGGTCGTGAAGAAATACCCGCCTCTGCTCTTGAAGGGAATATGA
TCAAGGACGTCGATGTAGTAGCGAATTGTATTAAAAAATTGGTAGAAAGGTTGAAGTTTACATCTAAAAATGTGGCATTG
GCTGTACCTGATTCGGCTGTTATTAGCAAAGTAGTGCAAATTAATGAAGGATTGACTGACCAGGAAATGGAAGAGCTTGT
TGTTATTGAAGCGGATAAGTATATTCCTTACCCAATAGATGAAATAAACCTTGATTTTGAAGTGTTAGGCCATTCTGCCA
AGAATTCAGCGCTGCTTGATGTTTTAATTGTGGCTTCAAGAGCAGAAAATGTTAATAGTCGTGTCGAGGCAGCTCATAGA
GCTGGCCTGGAGCCCAAAATCGTTGACGTTGAATCTTATGCGGTAGAACGTTCAGTGCAACAAATTGCGCAAGAATTGCC
AGCAAGTGGACAAGACAAAATTATAGCGATAGTAGATATTGGAACCAATTACACTCATTTATTTGCTTTGCATGGCATGC
GATTAATCTTTTCAAGAGAAGAAAAATTTGGTGGCATGCAGCTTGTTGAAGCTATTGCAGAACATTATCATATGAATTTA
GAGCAGGCTATTGCCCTAAAAAATCAGGGTAAATTACCAGAGGACTATGAATCTGCTGTATTAGAGCCTTTTAAGGACAT
GATTCTTTTGCAGATCAAACGCACTTTGCAGTTTTTTTATTCTACCAGTCAACATGGATTTGTTGACCATATTCTATTAG
CTGGAGGAATGGCAAGGCAACCAGGGTTGGCAGCGCTTATTCAAGAGCAATTAGGAGTGACTACTACAGTAGCAAATCCA
CTATCCTATATGTCTTTTGGTAAAAAAGTGAATTTGGATGCCATTAATAATGACGCGCCTACACTGATGGTGGCTTGTGG
GTTAGCTCTAAGGCATGTCGAGTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-352)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Legionella pneumophila strain ERS1305867	96.328	100	0.963
comM	Acinetobacter nosocomialis M2	42.655	100	0.427
pilM	Acinetobacter baumannii D1279779	42.373	100	0.424
comM	Acinetobacter baylyi ADP1	40.395	100	0.404