Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | BIZ52_RS05015 | Genome accession | NZ_CP017457 |
| Coordinates | 1106568..1107116 (+) | Length | 182 a.a. |
| NCBI ID | WP_027227634.1 | Uniprot ID | A0A2S6F1Z6 |
| Organism | Legionella pneumophila subsp. fraseri strain Detroit-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1101568..1112116
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BIZ52_RS05005 (BIZ52_04935) | ravI | 1104074..1105081 (-) | 1008 | WP_027227632.1 | Dot/Icm T4SS effector RavI | - |
| BIZ52_RS05010 (BIZ52_04940) | pilM | 1105500..1106564 (+) | 1065 | WP_027227633.1 | type IV pilus assembly protein PilM | Machinery gene |
| BIZ52_RS05015 (BIZ52_04945) | pilN | 1106568..1107116 (+) | 549 | WP_027227634.1 | PilN domain-containing protein | Machinery gene |
| BIZ52_RS05020 (BIZ52_04950) | pilO | 1107130..1107729 (+) | 600 | WP_027221266.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| BIZ52_RS05025 (BIZ52_04955) | pilP | 1107726..1108310 (+) | 585 | WP_027227635.1 | pilus assembly protein PilP | Machinery gene |
| BIZ52_RS05030 (BIZ52_04960) | pilQ | 1108314..1110410 (+) | 2097 | WP_027227636.1 | type IV pilus secretin PilQ | Machinery gene |
| BIZ52_RS05035 (BIZ52_04965) | aroK | 1110856..1111383 (+) | 528 | WP_010946667.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 182 a.a. Molecular weight: 21292.11 Da Isoelectric Point: 10.1404
>NTDB_id=198358 BIZ52_RS05015 WP_027227634.1 1106568..1107116(+) (pilN) [Legionella pneumophila subsp. fraseri strain Detroit-1]
MTEINLLPWREQKREQEKKLFTTMLLIGIIVAAAIVFLMNSYVSHLISNQTQRNQILQKEITALDEQIKEIKVLKQIREG
LISRMSIVQNLQSTRTLMVHLFDELIKITPPGIYITKMQREHDVITLWGYSESNTSISILMRNIEANVWIQNPVLTEIKK
IVEKKQSPNNEFKLSFVLKPKY
MTEINLLPWREQKREQEKKLFTTMLLIGIIVAAAIVFLMNSYVSHLISNQTQRNQILQKEITALDEQIKEIKVLKQIREG
LISRMSIVQNLQSTRTLMVHLFDELIKITPPGIYITKMQREHDVITLWGYSESNTSISILMRNIEANVWIQNPVLTEIKK
IVEKKQSPNNEFKLSFVLKPKY
Nucleotide
Download Length: 549 bp
>NTDB_id=198358 BIZ52_RS05015 WP_027227634.1 1106568..1107116(+) (pilN) [Legionella pneumophila subsp. fraseri strain Detroit-1]
ATGACTGAGATTAATTTATTACCATGGCGTGAGCAAAAACGGGAACAGGAAAAGAAATTATTCACGACTATGCTATTGAT
AGGGATTATCGTTGCCGCGGCAATCGTTTTTTTAATGAATTCTTATGTTTCCCATTTAATAAGTAATCAAACGCAGCGGA
ACCAGATTTTACAGAAAGAAATTACAGCCTTAGATGAGCAAATCAAGGAGATCAAGGTATTAAAGCAAATCAGGGAAGGT
TTGATTTCAAGGATGTCTATCGTGCAGAACCTGCAATCAACAAGAACGTTAATGGTTCATTTATTTGATGAGTTAATTAA
AATTACTCCTCCAGGAATTTACATAACCAAGATGCAAAGAGAACATGATGTCATAACACTCTGGGGGTATTCCGAATCGA
ATACAAGTATTTCTATTTTGATGAGAAATATAGAGGCCAATGTCTGGATACAAAATCCCGTACTTACTGAAATTAAAAAA
ATTGTTGAAAAAAAACAGTCTCCAAACAATGAATTTAAATTAAGTTTTGTGCTTAAACCCAAATATTAG
ATGACTGAGATTAATTTATTACCATGGCGTGAGCAAAAACGGGAACAGGAAAAGAAATTATTCACGACTATGCTATTGAT
AGGGATTATCGTTGCCGCGGCAATCGTTTTTTTAATGAATTCTTATGTTTCCCATTTAATAAGTAATCAAACGCAGCGGA
ACCAGATTTTACAGAAAGAAATTACAGCCTTAGATGAGCAAATCAAGGAGATCAAGGTATTAAAGCAAATCAGGGAAGGT
TTGATTTCAAGGATGTCTATCGTGCAGAACCTGCAATCAACAAGAACGTTAATGGTTCATTTATTTGATGAGTTAATTAA
AATTACTCCTCCAGGAATTTACATAACCAAGATGCAAAGAGAACATGATGTCATAACACTCTGGGGGTATTCCGAATCGA
ATACAAGTATTTCTATTTTGATGAGAAATATAGAGGCCAATGTCTGGATACAAAATCCCGTACTTACTGAAATTAAAAAA
ATTGTTGAAAAAAAACAGTCTCCAAACAATGAATTTAAATTAAGTTTTGTGCTTAAACCCAAATATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Legionella pneumophila strain ERS1305867 |
96.703 |
100 |
0.967 |