Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | BIZ52_RS05020 | Genome accession | NZ_CP017457 |
| Coordinates | 1107130..1107729 (+) | Length | 199 a.a. |
| NCBI ID | WP_027221266.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. fraseri strain Detroit-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1102130..1112729
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BIZ52_RS05005 (BIZ52_04935) | ravI | 1104074..1105081 (-) | 1008 | WP_027227632.1 | Dot/Icm T4SS effector RavI | - |
| BIZ52_RS05010 (BIZ52_04940) | pilM | 1105500..1106564 (+) | 1065 | WP_027227633.1 | type IV pilus assembly protein PilM | Machinery gene |
| BIZ52_RS05015 (BIZ52_04945) | pilN | 1106568..1107116 (+) | 549 | WP_027227634.1 | PilN domain-containing protein | Machinery gene |
| BIZ52_RS05020 (BIZ52_04950) | pilO | 1107130..1107729 (+) | 600 | WP_027221266.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| BIZ52_RS05025 (BIZ52_04955) | pilP | 1107726..1108310 (+) | 585 | WP_027227635.1 | pilus assembly protein PilP | Machinery gene |
| BIZ52_RS05030 (BIZ52_04960) | pilQ | 1108314..1110410 (+) | 2097 | WP_027227636.1 | type IV pilus secretin PilQ | Machinery gene |
| BIZ52_RS05035 (BIZ52_04965) | aroK | 1110856..1111383 (+) | 528 | WP_010946667.1 | shikimate kinase AroK | - |
| BIZ52_RS05040 (BIZ52_04970) | aroB | 1111370..1112473 (+) | 1104 | WP_027227637.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22441.13 Da Isoelectric Point: 5.3305
>NTDB_id=198359 BIZ52_RS05020 WP_027221266.1 1107130..1107729(+) (pilO) [Legionella pneumophila subsp. fraseri strain Detroit-1]
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLDTLEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMGITAKIYRYRAQ
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLDTLEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMGITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=198359 BIZ52_RS05020 WP_027221266.1 1107130..1107729(+) (pilO) [Legionella pneumophila subsp. fraseri strain Detroit-1]
ATGGATACAGTCAATTTAAGTGAATTAACTCTGGAGAATGTCGGCCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGCATCAGTATATTGATAATTGGATTGGGATATTGGCTTATTGTTAAGCCTAATTTTGAGCAATTGGATACACTGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAACAACATCAGGCAGCAAATCTACAAGCCTATCGTAATCAGTTA
CAGTTAATGAATGAACGCTTCGGAACCATGCTAAAACAACTACCGGCAAAAAATGAAATGCCTGGTCTTTTGGAAGAAAT
ATCTAAAACAGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTAGCAAGATTTTTAAGTCGTGTCGCTGAAATGAACAGA
ATCGTGACTCTGCATGAATTTAGTGTTGAGGGGGTATCCTCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGGTATCACCGCTAAAATATACAGATATCGGGCACAATGA
ATGGATACAGTCAATTTAAGTGAATTAACTCTGGAGAATGTCGGCCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGCATCAGTATATTGATAATTGGATTGGGATATTGGCTTATTGTTAAGCCTAATTTTGAGCAATTGGATACACTGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAACAACATCAGGCAGCAAATCTACAAGCCTATCGTAATCAGTTA
CAGTTAATGAATGAACGCTTCGGAACCATGCTAAAACAACTACCGGCAAAAAATGAAATGCCTGGTCTTTTGGAAGAAAT
ATCTAAAACAGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTAGCAAGATTTTTAAGTCGTGTCGCTGAAATGAACAGA
ATCGTGACTCTGCATGAATTTAGTGTTGAGGGGGTATCCTCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGGTATCACCGCTAAAATATACAGATATCGGGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
97.487 |
100 |
0.975 |
| comO | Acinetobacter baylyi ADP1 |
39.894 |
94.472 |
0.377 |
| pilO | Acinetobacter baumannii D1279779 |
38.22 |
95.98 |
0.367 |