Detailed information NTG0196902

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: BL1202_RS20480
• Genome accession: NZ_CP017247
• Coordinates: 3930659..3931231 (-)
• Length: 190 a.a.
• NCBI ID: WP_069500826.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain BL1202
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3925659..3936231

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BL1202_RS20455 (BL1202_04190)	-	3925984..3926391 (-)	408	WP_003185927.1	CBS domain-containing protein	-
BL1202_RS20460 (BL1202_04191)	-	3926454..3927410 (-)	957	WP_003185929.1	magnesium transporter CorA family protein	-
BL1202_RS20465 (BL1202_04192)	-	3927571..3928869 (+)	1299	WP_003185931.1	hemolysin family protein	-
BL1202_RS20470 (BL1202_04193)	-	3929030..3930241 (+)	1212	WP_003185933.1	ammonium transporter	-
BL1202_RS20475 (BL1202_04194)	-	3930260..3930610 (+)	351	WP_003185936.1	P-II family nitrogen regulator	-
BL1202_RS20480 (BL1202_04195)	clpP	3930659..3931231 (-)	573	WP_069500826.1	ATP-dependent Clp protease proteolytic subunit	Regulator
BL1202_RS20485 (BL1202_04196)	-	3931245..3931850 (-)	606	WP_017474248.1	RNA polymerase sigma factor	-
BL1202_RS20490 (BL1202_04197)	-	3931987..3932862 (-)	876	WP_003185941.1	M23 family metallopeptidase	-
BL1202_RS20495 (BL1202_04198)	-	3933055..3933552 (+)	498	WP_003185943.1	GNAT family N-acetyltransferase	-
BL1202_RS20500 (BL1202_04199)	-	3933600..3934043 (-)	444	WP_009329719.1	YwnF family protein	-
BL1202_RS20505 (BL1202_04200)	cls	3934293..3935741 (+)	1449	WP_025806104.1	cardiolipin synthase	-

Sequence

Protein

• Length: 190 a.a.
• Molecular weight: 21107.27 Da
• Isoelectric Point: 5.1171

>NTDB_id=196902 BL1202_RS20480 WP_069500826.1 3930659..3931231(-) (clpP) [Bacillus licheniformis strain BL1202]
MNTIPYVIEKTAAGERSYDIFSRLLKDRIIMIGSEFNDDLANRVTAQLLFLSAEDNEKDISIYINSPGGSTSAGYAILDT
MDYVKPDVRTICVGMAASMGAILLAGGAKDKRYALKNSEIMIHQPLGGVKGQATDMEISAKRIIKLREKIERFFHERTGQ
PIEKLKADMERDYFMDADEAKAYGVIDAVL

Nucleotide

• Length: 573 bp

>NTDB_id=196902 BL1202_RS20480 WP_069500826.1 3930659..3931231(-) (clpP) [Bacillus licheniformis strain BL1202]
ATGAACACCATTCCTTACGTCATTGAGAAAACGGCTGCCGGTGAAAGATCGTACGATATTTTTTCCAGACTTTTAAAAGA
CCGGATCATTATGATCGGTTCTGAATTCAACGATGACCTCGCCAATCGGGTCACCGCCCAATTGCTGTTTTTGTCAGCTG
AAGACAATGAAAAAGACATTTCGATCTATATCAACAGCCCGGGCGGATCAACTTCCGCGGGATATGCAATTTTGGATACG
ATGGATTATGTGAAGCCTGATGTCCGCACGATATGCGTCGGAATGGCCGCTTCCATGGGAGCGATTCTCCTCGCCGGCGG
AGCAAAAGACAAACGGTATGCACTCAAAAACAGCGAAATCATGATCCATCAGCCGCTCGGCGGCGTCAAAGGACAGGCGA
CAGACATGGAGATTTCAGCGAAGCGGATCATCAAACTGAGGGAAAAAATCGAGCGCTTCTTTCACGAACGAACGGGCCAG
CCCATTGAAAAACTAAAAGCCGACATGGAACGCGATTACTTTATGGATGCGGACGAAGCGAAGGCATACGGTGTTATTGA
TGCTGTTTTGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-190)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	64.737	100	0.647
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.032	98.421	0.611
clpP	Streptococcus thermophilus LMD-9	55.026	99.474	0.547
clpP	Streptococcus pneumoniae Rx1	55.026	99.474	0.547
clpP	Streptococcus pneumoniae D39	55.026	99.474	0.547
clpP	Streptococcus thermophilus LMG 18311	55.026	99.474	0.547
clpP	Streptococcus pneumoniae R6	55.026	99.474	0.547
clpP	Streptococcus pneumoniae TIGR4	55.026	99.474	0.547
clpP	Streptococcus mutans UA159	54.497	99.474	0.542
clpP	Streptococcus pyogenes JRS4	53.968	99.474	0.537
clpP	Streptococcus pyogenes MGAS315	53.968	99.474	0.537
clpP	Lactococcus lactis subsp. cremoris KW2	51.323	99.474	0.511
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	50.794	99.474	0.505