Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | BHS01_RS08835 | Genome accession | NZ_CP017195 |
| Coordinates | 1805233..1805829 (-) | Length | 198 a.a. |
| NCBI ID | WP_097024292.1 | Uniprot ID | - |
| Organism | Lactococcus paracarnosus strain TMW 2.1615 | ||
| Function | degradation of ComX; require for competence development (at the early growth phase); repress competence development (at the mid-logarithmic growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1800233..1810829
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BHS01_RS08795 (BHS01_08810) | - | 1800579..1801169 (+) | 591 | WP_109834010.1 | CYTH domain-containing protein | - |
| BHS01_RS08800 (BHS01_08815) | - | 1801439..1801966 (+) | 528 | WP_109834009.1 | DsbA family protein | - |
| BHS01_RS08805 (BHS01_08820) | - | 1802072..1802380 (-) | 309 | WP_188347986.1 | hypothetical protein | - |
| BHS01_RS08810 (BHS01_08825) | - | 1802385..1802666 (-) | 282 | WP_188347987.1 | hypothetical protein | - |
| BHS01_RS08815 (BHS01_08830) | - | 1802673..1803635 (-) | 963 | WP_188347988.1 | hypothetical protein | - |
| BHS01_RS08820 (BHS01_08835) | - | 1803652..1803915 (-) | 264 | WP_109835214.1 | hypothetical protein | - |
| BHS01_RS08825 (BHS01_08840) | - | 1804477..1804797 (-) | 321 | WP_109835215.1 | DUF2129 domain-containing protein | - |
| BHS01_RS08830 (BHS01_08845) | - | 1804769..1805155 (-) | 387 | WP_109835216.1 | hypothetical protein | - |
| BHS01_RS08835 (BHS01_08850) | clpP | 1805233..1805829 (-) | 597 | WP_097024292.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| BHS01_RS08840 (BHS01_08855) | - | 1805973..1807400 (-) | 1428 | WP_411800570.1 | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase | - |
| BHS01_RS08845 (BHS01_08860) | - | 1807763..1808458 (-) | 696 | WP_109835218.1 | HAD family hydrolase | - |
| BHS01_RS08850 (BHS01_08865) | - | 1808445..1808897 (-) | 453 | WP_109835219.1 | PTS sugar transporter subunit IIA | - |
| BHS01_RS08855 (BHS01_08870) | - | 1808894..1809403 (-) | 510 | WP_079505111.1 | PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB | - |
| BHS01_RS08860 (BHS01_08875) | - | 1809431..1810291 (-) | 861 | WP_109835594.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21803.92 Da Isoelectric Point: 4.8744
>NTDB_id=196579 BHS01_RS08835 WP_097024292.1 1805233..1805829(-) (clpP) [Lactococcus paracarnosus strain TMW 2.1615]
MVLIPTVIEQSSRGERAYDIYSRLLKDRIIMLTGEVEDNMANAVIAQLLFLDAQDATKDIYLYINSPGGSVSAGLAIVDT
MNFIKSDVQTIVMGVAASMGTIIASSGAKGKRFMLPNAEYLIHQPMGGTGGGTQQTDMQIVADHLSRTRKTLEKILADNS
GQTVNKIHKDAERDRWMSAEETLDYGFIDEIMNRNELK
MVLIPTVIEQSSRGERAYDIYSRLLKDRIIMLTGEVEDNMANAVIAQLLFLDAQDATKDIYLYINSPGGSVSAGLAIVDT
MNFIKSDVQTIVMGVAASMGTIIASSGAKGKRFMLPNAEYLIHQPMGGTGGGTQQTDMQIVADHLSRTRKTLEKILADNS
GQTVNKIHKDAERDRWMSAEETLDYGFIDEIMNRNELK
Nucleotide
Download Length: 597 bp
>NTDB_id=196579 BHS01_RS08835 WP_097024292.1 1805233..1805829(-) (clpP) [Lactococcus paracarnosus strain TMW 2.1615]
ATGGTACTCATTCCTACAGTCATCGAACAATCTAGTCGCGGTGAGCGTGCTTACGATATTTATTCACGTCTTTTGAAAGA
CAGAATTATCATGCTTACAGGCGAAGTAGAAGATAATATGGCCAATGCTGTTATTGCGCAACTTTTGTTCTTAGATGCCC
AAGATGCGACTAAAGATATTTATTTATACATCAACTCACCAGGTGGATCAGTTTCGGCAGGTCTAGCTATTGTAGACACG
ATGAACTTTATCAAATCTGATGTACAGACGATTGTCATGGGTGTTGCGGCATCTATGGGTACGATCATCGCCTCATCTGG
TGCTAAGGGCAAACGTTTCATGCTACCAAATGCTGAATACCTCATCCACCAACCGATGGGTGGTACTGGTGGTGGTACGC
AACAAACAGATATGCAGATTGTTGCTGACCATTTGTCACGAACACGTAAAACATTAGAAAAAATCTTGGCTGATAATTCT
GGTCAAACAGTGAATAAAATTCATAAAGACGCTGAGCGGGATCGCTGGATGTCTGCAGAAGAAACCTTGGATTATGGGTT
TATTGACGAAATCATGAACCGTAACGAGTTAAAATAA
ATGGTACTCATTCCTACAGTCATCGAACAATCTAGTCGCGGTGAGCGTGCTTACGATATTTATTCACGTCTTTTGAAAGA
CAGAATTATCATGCTTACAGGCGAAGTAGAAGATAATATGGCCAATGCTGTTATTGCGCAACTTTTGTTCTTAGATGCCC
AAGATGCGACTAAAGATATTTATTTATACATCAACTCACCAGGTGGATCAGTTTCGGCAGGTCTAGCTATTGTAGACACG
ATGAACTTTATCAAATCTGATGTACAGACGATTGTCATGGGTGTTGCGGCATCTATGGGTACGATCATCGCCTCATCTGG
TGCTAAGGGCAAACGTTTCATGCTACCAAATGCTGAATACCTCATCCACCAACCGATGGGTGGTACTGGTGGTGGTACGC
AACAAACAGATATGCAGATTGTTGCTGACCATTTGTCACGAACACGTAAAACATTAGAAAAAATCTTGGCTGATAATTCT
GGTCAAACAGTGAATAAAATTCATAAAGACGCTGAGCGGGATCGCTGGATGTCTGCAGAAGAAACCTTGGATTATGGGTT
TATTGACGAAATCATGAACCGTAACGAGTTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus mutans UA159 |
85.714 |
98.99 |
0.848 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
84.184 |
98.99 |
0.833 |
| clpP | Streptococcus pyogenes JRS4 |
84.184 |
98.99 |
0.833 |
| clpP | Streptococcus pyogenes MGAS315 |
84.184 |
98.99 |
0.833 |
| clpP | Streptococcus pneumoniae R6 |
84.103 |
98.485 |
0.828 |
| clpP | Streptococcus pneumoniae TIGR4 |
84.103 |
98.485 |
0.828 |
| clpP | Streptococcus pneumoniae Rx1 |
84.103 |
98.485 |
0.828 |
| clpP | Streptococcus pneumoniae D39 |
84.103 |
98.485 |
0.828 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
83.673 |
98.99 |
0.828 |
| clpP | Streptococcus thermophilus LMD-9 |
83.163 |
98.99 |
0.823 |
| clpP | Streptococcus thermophilus LMG 18311 |
83.163 |
98.99 |
0.823 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.763 |
97.98 |
0.576 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
57.071 |
100 |
0.571 |