Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | BHS00_RS08005 | Genome accession | NZ_CP017194 |
| Coordinates | 1669666..1670262 (-) | Length | 198 a.a. |
| NCBI ID | WP_079505119.1 | Uniprot ID | - |
| Organism | Lactococcus carnosus strain TMW 2.1612 | ||
| Function | degradation of ComX; require for competence development (at the early growth phase); repress competence development (at the mid-logarithmic growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1664666..1675262
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BHS00_RS07970 (BHS00_07930) | - | 1664886..1665773 (-) | 888 | WP_188347810.1 | RluA family pseudouridine synthase | - |
| BHS00_RS07975 (BHS00_07935) | - | 1665770..1666588 (-) | 819 | WP_143464956.1 | NAD kinase | - |
| BHS00_RS07980 (BHS00_07940) | - | 1666569..1667246 (-) | 678 | WP_097024303.1 | GTP pyrophosphokinase | - |
| BHS00_RS07985 (BHS00_07945) | - | 1667514..1668104 (+) | 591 | WP_188347811.1 | CYTH domain-containing protein | - |
| BHS00_RS07990 (BHS00_07950) | - | 1668376..1668903 (+) | 528 | WP_188347812.1 | DsbA family protein | - |
| BHS00_RS07995 (BHS00_07955) | - | 1668900..1669223 (-) | 324 | WP_079505123.1 | DUF2129 domain-containing protein | - |
| BHS00_RS08000 (BHS00_07960) | - | 1669195..1669581 (-) | 387 | WP_188347813.1 | hypothetical protein | - |
| BHS00_RS08005 (BHS00_07965) | clpP | 1669666..1670262 (-) | 597 | WP_079505119.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| BHS00_RS08010 (BHS00_07970) | - | 1670406..1671833 (-) | 1428 | WP_418766674.1 | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase | - |
| BHS00_RS08015 (BHS00_07975) | - | 1672196..1672891 (-) | 696 | WP_079505115.1 | HAD family hydrolase | - |
| BHS00_RS08020 (BHS00_07980) | - | 1672878..1673330 (-) | 453 | WP_079505113.1 | PTS sugar transporter subunit IIA | - |
| BHS00_RS08025 (BHS00_07985) | - | 1673327..1673836 (-) | 510 | WP_079505111.1 | PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB | - |
| BHS00_RS08030 (BHS00_07990) | - | 1673864..1674739 (-) | 876 | WP_079507841.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| BHS00_RS10735 | - | 1674696..1674803 (+) | 108 | Protein_1560 | hypothetical protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21817.94 Da Isoelectric Point: 4.8819
>NTDB_id=196547 BHS00_RS08005 WP_079505119.1 1669666..1670262(-) (clpP) [Lactococcus carnosus strain TMW 2.1612]
MVLIPTVIEQSSRGERAYDIYSRLLKDRIIMLTGEVEDNMANAVIAQLLFLDAQDATKDIYLYINSPGGSVSAGLAIVDT
MNFIKSDVQTIVMGVAASMGTIIASSGAKGKRFMLPNAEYLIHQPMGGTGGGTQQTDMQIVADHLSRTRKTLEKILADNS
GQTVNKIHKDAERDRWMSAEETLEYGFIDEIMNRNELK
MVLIPTVIEQSSRGERAYDIYSRLLKDRIIMLTGEVEDNMANAVIAQLLFLDAQDATKDIYLYINSPGGSVSAGLAIVDT
MNFIKSDVQTIVMGVAASMGTIIASSGAKGKRFMLPNAEYLIHQPMGGTGGGTQQTDMQIVADHLSRTRKTLEKILADNS
GQTVNKIHKDAERDRWMSAEETLEYGFIDEIMNRNELK
Nucleotide
Download Length: 597 bp
>NTDB_id=196547 BHS00_RS08005 WP_079505119.1 1669666..1670262(-) (clpP) [Lactococcus carnosus strain TMW 2.1612]
ATGGTACTCATTCCTACAGTCATCGAACAATCAAGTCGCGGTGAGCGTGCTTACGATATTTATTCACGTCTTTTGAAAGA
CAGAATTATCATGCTTACAGGCGAAGTAGAAGACAATATGGCCAATGCTGTTATTGCGCAACTTTTGTTCTTAGATGCCC
AAGATGCGACTAAAGATATTTATTTATACATCAACTCACCAGGTGGATCAGTTTCGGCAGGTCTAGCTATTGTAGACACG
ATGAACTTTATCAAATCTGATGTACAGACGATTGTCATGGGTGTTGCGGCATCTATGGGTACGATCATCGCCTCATCTGG
TGCTAAGGGCAAACGTTTCATGCTACCAAATGCTGAATACCTCATCCACCAACCGATGGGTGGTACTGGTGGTGGTACGC
AACAAACAGATATGCAGATTGTTGCTGACCATTTGTCACGAACACGTAAAACATTAGAAAAAATCTTGGCTGATAATTCT
GGTCAAACAGTGAATAAAATTCATAAAGATGCTGAGCGCGATCGCTGGATGTCTGCAGAAGAAACTCTTGAATATGGGTT
TATTGACGAAATCATGAACCGTAACGAATTAAAATAA
ATGGTACTCATTCCTACAGTCATCGAACAATCAAGTCGCGGTGAGCGTGCTTACGATATTTATTCACGTCTTTTGAAAGA
CAGAATTATCATGCTTACAGGCGAAGTAGAAGACAATATGGCCAATGCTGTTATTGCGCAACTTTTGTTCTTAGATGCCC
AAGATGCGACTAAAGATATTTATTTATACATCAACTCACCAGGTGGATCAGTTTCGGCAGGTCTAGCTATTGTAGACACG
ATGAACTTTATCAAATCTGATGTACAGACGATTGTCATGGGTGTTGCGGCATCTATGGGTACGATCATCGCCTCATCTGG
TGCTAAGGGCAAACGTTTCATGCTACCAAATGCTGAATACCTCATCCACCAACCGATGGGTGGTACTGGTGGTGGTACGC
AACAAACAGATATGCAGATTGTTGCTGACCATTTGTCACGAACACGTAAAACATTAGAAAAAATCTTGGCTGATAATTCT
GGTCAAACAGTGAATAAAATTCATAAAGATGCTGAGCGCGATCGCTGGATGTCTGCAGAAGAAACTCTTGAATATGGGTT
TATTGACGAAATCATGAACCGTAACGAATTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus mutans UA159 |
85.714 |
98.99 |
0.848 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
84.694 |
98.99 |
0.838 |
| clpP | Streptococcus pyogenes MGAS315 |
84.184 |
98.99 |
0.833 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
84.184 |
98.99 |
0.833 |
| clpP | Streptococcus pyogenes JRS4 |
84.184 |
98.99 |
0.833 |
| clpP | Streptococcus pneumoniae TIGR4 |
84.615 |
98.485 |
0.833 |
| clpP | Streptococcus pneumoniae Rx1 |
84.615 |
98.485 |
0.833 |
| clpP | Streptococcus pneumoniae D39 |
84.615 |
98.485 |
0.833 |
| clpP | Streptococcus pneumoniae R6 |
84.615 |
98.485 |
0.833 |
| clpP | Streptococcus thermophilus LMG 18311 |
83.673 |
98.99 |
0.828 |
| clpP | Streptococcus thermophilus LMD-9 |
83.673 |
98.99 |
0.828 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
59.278 |
97.98 |
0.581 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
57.576 |
100 |
0.576 |