Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   CDH83_RS01885 Genome accession   NZ_CP021770
Coordinates   334636..334824 (+) Length   62 a.a.
NCBI ID   WP_000027835.1    Uniprot ID   Q8E0V0
Organism   Streptococcus agalactiae strain B508     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 329636..339824
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CDH83_RS01860 (CDH83_01825) - 330076..331452 (+) 1377 WP_000594351.1 FtsX-like permease family protein -
  CDH83_RS01865 (CDH83_01830) - 331549..332202 (+) 654 WP_047198430.1 response regulator transcription factor -
  CDH83_RS01870 (CDH83_01835) - 332199..333517 (+) 1319 Protein_325 HAMP domain-containing sensor histidine kinase -
  CDH83_RS01875 (CDH83_01840) - 333569..334216 (-) 648 Protein_326 IS3 family transposase -
  CDH83_RS01880 (CDH83_01845) - 334394..334594 (+) 201 WP_000076708.1 CsbD family protein -
  CDH83_RS01885 (CDH83_01850) prx 334636..334824 (+) 189 WP_000027835.1 hypothetical protein Regulator
  CDH83_RS01890 (CDH83_01855) - 335249..336454 (+) 1206 WP_000078931.1 FtsW/RodA/SpoVE family cell cycle protein -
  CDH83_RS01895 (CDH83_01860) - 336573..337133 (+) 561 WP_001106189.1 HAD-IA family hydrolase -
  CDH83_RS01900 (CDH83_01865) gyrB 337134..339086 (+) 1953 WP_000134196.1 DNA topoisomerase (ATP-hydrolyzing) subunit B -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7180.25 Da        Isoelectric Point: 4.7815

>NTDB_id=195877 CDH83_RS01885 WP_000027835.1 334636..334824(+) (prx) [Streptococcus agalactiae strain B508]
MSIRTDIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLLHEEVREEEVVTVERVLDVLRKLS

Nucleotide


Download         Length: 189 bp        

>NTDB_id=195877 CDH83_RS01885 WP_000027835.1 334636..334824(+) (prx) [Streptococcus agalactiae strain B508]
TTGTCTATCAGAACAGATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGT
GCGTAAAAACGGAAAGATATTTGATTATGTGTTACTACACGAAGAAGTGAGAGAAGAAGAGGTTGTTACAGTTGAGAGAG
TGCTTGATGTACTGAGGAAGTTATCATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8E0V0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

72.222

87.097

0.629
  prx Streptococcus pyogenes MGAS8232

69.091

88.71

0.613
  prx Streptococcus pyogenes MGAS315

66.667

87.097

0.581
  prx Streptococcus pyogenes MGAS315

85

64.516

0.548
  prx Streptococcus pyogenes MGAS315

61.818

88.71

0.548
  prx Streptococcus pyogenes MGAS315

74.359

62.903

0.468
  prx Streptococcus pyogenes MGAS315

78.378

59.677

0.468