Detailed information NTG0195383

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: A7J08_RS00915
• Genome accession: NZ_CP017088
• Coordinates: 147920..148354 (+)
• Length: 144 a.a.
• NCBI ID: WP_053866670.1
• Uniprot ID: -
• Organism: Streptococcus suis strain SRD478
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 142920..153354

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A7J08_RS00880 (A7J08_00875)	-	143507..143881 (+)	375	WP_024385120.1	DUF1033 family protein	-
A7J08_RS00885 (A7J08_00880)	-	143915..144826 (-)	912	Protein_136	S66 peptidase family protein	-
A7J08_RS00890 (A7J08_00885)	comYA	145098..146048 (+)	951	WP_053867353.1	competence type IV pilus ATPase ComGA	Machinery gene
A7J08_RS00895 (A7J08_00890)	comYB	145960..146997 (+)	1038	WP_238600014.1	competence type IV pilus assembly protein ComGB	Machinery gene
A7J08_RS00900 (A7J08_00895)	comYC	146999..147280 (+)	282	WP_053866667.1	competence type IV pilus major pilin ComGC	Machinery gene
A7J08_RS00905 (A7J08_00900)	comGD	147261..147668 (+)	408	WP_053866668.1	competence type IV pilus minor pilin ComGD	-
A7J08_RS00910 (A7J08_00905)	comYE	147640..147933 (+)	294	WP_053866669.1	competence type IV pilus minor pilin ComGE	Machinery gene
A7J08_RS00915 (A7J08_00910)	comGF/cglF	147920..148354 (+)	435	WP_053866670.1	competence type IV pilus minor pilin ComGF	Machinery gene
A7J08_RS00920 (A7J08_00915)	comGG	148332..148745 (+)	414	WP_053866671.1	competence type IV pilus minor pilin ComGG	-
A7J08_RS00925 (A7J08_00920)	comYH	148795..149748 (+)	954	WP_053866672.1	class I SAM-dependent methyltransferase	Machinery gene
A7J08_RS00930 (A7J08_00925)	-	149798..150985 (+)	1188	WP_053866673.1	acetate kinase	-
A7J08_RS00940 (A7J08_00930)	-	151299..151850 (+)	552	WP_053866674.1	folate family ECF transporter S component	-
A7J08_RS00945 (A7J08_00935)	-	151906..153162 (+)	1257	WP_053867489.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16312.68 Da
• Isoelectric Point: 8.8229

>NTDB_id=195383 A7J08_RS00915 WP_053866670.1 147920..148354(+) (comGF/cglF) [Streptococcus suis strain SRD478]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAALVKVENGKVYVDKGG
QALAFGKSRSDDFRKTNDRGQGYQPMLYHLDSAAISQENQLVRINFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=195383 A7J08_RS00915 WP_053866670.1 147920..148354(+) (comGF/cglF) [Streptococcus suis strain SRD478]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCTTGGAATGCTTGGTAGCCTTAGTCATTCTTTCAGGTAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAACTGCTGGTCCAAGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGTCAATTGCGGTCGGAGTGGGACCAGGCTGCCTTGGTCAAGGTTGAAAATGGCAAGGTCTATGTTGATAAGGGAGGT
CAGGCTTTGGCCTTTGGCAAGTCACGGTCGGATGATTTTCGGAAAACAAATGACAGGGGACAGGGCTATCAGCCCATGCT
CTATCATCTAGACAGCGCAGCTATTTCCCAAGAAAATCAGCTGGTGCGCATCAACTTTAGCTTTAAAAATGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	54.61	97.917	0.535
comGF/cglF	Streptococcus pneumoniae Rx1	54.61	97.917	0.535
comGF/cglF	Streptococcus pneumoniae D39	54.61	97.917	0.535
comGF/cglF	Streptococcus pneumoniae R6	54.61	97.917	0.535
comGF/cglF	Streptococcus mitis NCTC 12261	55.224	93.056	0.514
comYF	Streptococcus mutans UA140	49.306	100	0.493
comGF/cglF	Streptococcus mitis SK321	52.239	93.056	0.486
comYF	Streptococcus mutans UA159	48.611	100	0.486
comGF	Lactococcus lactis subsp. cremoris KW2	47.518	97.917	0.465