Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | A7J08_RS00925 | Genome accession | NZ_CP017088 |
| Coordinates | 148795..149748 (+) | Length | 317 a.a. |
| NCBI ID | WP_053866672.1 | Uniprot ID | A0A3S5XAM7 |
| Organism | Streptococcus suis strain SRD478 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 143795..154748
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7J08_RS00885 (A7J08_00880) | - | 143915..144826 (-) | 912 | Protein_136 | S66 peptidase family protein | - |
| A7J08_RS00890 (A7J08_00885) | comYA | 145098..146048 (+) | 951 | WP_053867353.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| A7J08_RS00895 (A7J08_00890) | comYB | 145960..146997 (+) | 1038 | WP_238600014.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| A7J08_RS00900 (A7J08_00895) | comYC | 146999..147280 (+) | 282 | WP_053866667.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| A7J08_RS00905 (A7J08_00900) | comGD | 147261..147668 (+) | 408 | WP_053866668.1 | competence type IV pilus minor pilin ComGD | - |
| A7J08_RS00910 (A7J08_00905) | comYE | 147640..147933 (+) | 294 | WP_053866669.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| A7J08_RS00915 (A7J08_00910) | comGF/cglF | 147920..148354 (+) | 435 | WP_053866670.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| A7J08_RS00920 (A7J08_00915) | comGG | 148332..148745 (+) | 414 | WP_053866671.1 | competence type IV pilus minor pilin ComGG | - |
| A7J08_RS00925 (A7J08_00920) | comYH | 148795..149748 (+) | 954 | WP_053866672.1 | class I SAM-dependent methyltransferase | Machinery gene |
| A7J08_RS00930 (A7J08_00925) | - | 149798..150985 (+) | 1188 | WP_053866673.1 | acetate kinase | - |
| A7J08_RS00940 (A7J08_00930) | - | 151299..151850 (+) | 552 | WP_053866674.1 | folate family ECF transporter S component | - |
| A7J08_RS00945 (A7J08_00935) | - | 151906..153162 (+) | 1257 | WP_053867489.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
| A7J08_RS00950 (A7J08_00940) | pepA | 153207..154268 (-) | 1062 | WP_024414312.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35682.76 Da Isoelectric Point: 4.4133
>NTDB_id=195384 A7J08_RS00925 WP_053866672.1 148795..149748(+) (comYH) [Streptococcus suis strain SRD478]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVADQHETDLVINNNKTLKQLDLTKEEWRRAFQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVSTSKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSLQ
SDLLKGWLQEQANIVAMIALPPSLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVADQHETDLVINNNKTLKQLDLTKEEWRRAFQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVSTSKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSLQ
SDLLKGWLQEQANIVAMIALPPSLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=195384 A7J08_RS00925 WP_053866672.1 148795..149748(+) (comYH) [Streptococcus suis strain SRD478]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTGGGTACCAA
TATCTATGATGCAATGATTGAGCAAAATGCTGCTTACGTAGCTGATCAGCATGAGACAGATCTTGTTATCAATAATAACA
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGCCGTGCCTTCCAATTCCTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTATAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTGGACCAACTAGTATC
TACTTCCAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACTATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCCAGCCGTTATCAGGTTGCCAGTCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAGTCCCTCAAATATCTGGAAAAGGATGGATTCGCTATTCTCTTGGCTCCAAATGATTTGTTGACTAGTCTGCAA
AGCGATTTACTGAAAGGCTGGTTACAAGAACAAGCCAATATCGTTGCCATGATTGCCCTGCCACCAAGTCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTGGGTACCAA
TATCTATGATGCAATGATTGAGCAAAATGCTGCTTACGTAGCTGATCAGCATGAGACAGATCTTGTTATCAATAATAACA
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGCCGTGCCTTCCAATTCCTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTATAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTGGACCAACTAGTATC
TACTTCCAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACTATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCCAGCCGTTATCAGGTTGCCAGTCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAGTCCCTCAAATATCTGGAAAAGGATGGATTCGCTATTCTCTTGGCTCCAAATGATTTGTTGACTAGTCTGCAA
AGCGATTTACTGAAAGGCTGGTTACAAGAACAAGCCAATATCGTTGCCATGATTGCCCTGCCACCAAGTCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
61.392 |
99.685 |
0.612 |
| comYH | Streptococcus mutans UA159 |
61.076 |
99.685 |
0.609 |