Detailed information
Bioinformatically predicted
Overview
| Name | comGE/cglE | Type | Machinery gene |
| Locus tag | BFM96_RS04220 | Genome accession | NZ_CP016953 |
| Coordinates | 874141..874431 (+) | Length | 96 a.a. |
| NCBI ID | WP_068990728.1 | Uniprot ID | - |
| Organism | Streptococcus himalayensis strain HTS2 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 869141..879431
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BFM96_RS04195 | - | 871117..871482 (+) | 366 | WP_068990721.1 | DUF1033 family protein | - |
| BFM96_RS04200 | comGA/cglA/cilD | 871544..872485 (+) | 942 | WP_068990723.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BFM96_RS04205 | comYB | 872406..873449 (+) | 1044 | WP_068994164.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| BFM96_RS04210 | comGC/cglC | 873461..873781 (+) | 321 | WP_068994166.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BFM96_RS04215 | comYD | 873792..874169 (+) | 378 | WP_068990726.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| BFM96_RS04220 | comGE/cglE | 874141..874431 (+) | 291 | WP_068990728.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| BFM96_RS04225 | comGF/cglF | 874397..874855 (+) | 459 | WP_145939743.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| BFM96_RS04230 | comGG | 874827..875291 (+) | 465 | WP_068990735.1 | competence type IV pilus minor pilin ComGG | - |
| BFM96_RS04235 | comYH | 875335..876282 (+) | 948 | WP_068990737.1 | class I SAM-dependent methyltransferase | Machinery gene |
| BFM96_RS04240 | - | 876341..877531 (+) | 1191 | WP_068990741.1 | acetate kinase | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10799.53 Da Isoelectric Point: 6.0821
>NTDB_id=194014 BFM96_RS04220 WP_068990728.1 874141..874431(+) (comGE/cglE) [Streptococcus himalayensis strain HTS2]
MEKLRKQAVEGSILLEALLAFSVFAFIATFLLGHIHDSRKEQAQQLAAEEVLRAAKMALQTDKSDLTVNEVDIHVEKSAQ
LLVVYHGKEEIIRVEK
MEKLRKQAVEGSILLEALLAFSVFAFIATFLLGHIHDSRKEQAQQLAAEEVLRAAKMALQTDKSDLTVNEVDIHVEKSAQ
LLVVYHGKEEIIRVEK
Nucleotide
Download Length: 291 bp
>NTDB_id=194014 BFM96_RS04220 WP_068990728.1 874141..874431(+) (comGE/cglE) [Streptococcus himalayensis strain HTS2]
ATGGAAAAATTAAGAAAACAAGCAGTTGAGGGGAGCATTTTATTGGAGGCTCTCCTTGCCTTTAGTGTCTTTGCGTTTAT
TGCAACATTTTTGCTGGGGCATATCCATGATTCTAGAAAGGAACAAGCCCAGCAATTAGCAGCAGAAGAAGTCCTACGTG
CAGCAAAAATGGCCTTACAGACAGATAAAAGTGATTTGACAGTGAATGAGGTGGATATCCATGTGGAAAAATCAGCCCAG
CTTCTTGTCGTCTATCATGGAAAGGAGGAAATCATCCGTGTGGAAAAATAA
ATGGAAAAATTAAGAAAACAAGCAGTTGAGGGGAGCATTTTATTGGAGGCTCTCCTTGCCTTTAGTGTCTTTGCGTTTAT
TGCAACATTTTTGCTGGGGCATATCCATGATTCTAGAAAGGAACAAGCCCAGCAATTAGCAGCAGAAGAAGTCCTACGTG
CAGCAAAAATGGCCTTACAGACAGATAAAAGTGATTTGACAGTGAATGAGGTGGATATCCATGTGGAAAAATCAGCCCAG
CTTCTTGTCGTCTATCATGGAAAGGAGGAAATCATCCGTGTGGAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE/cglE | Streptococcus pneumoniae Rx1 |
50 |
100 |
0.51 |
| comGE/cglE | Streptococcus pneumoniae D39 |
50 |
100 |
0.51 |
| comGE/cglE | Streptococcus pneumoniae R6 |
50 |
100 |
0.51 |
| comGE/cglE | Streptococcus pneumoniae TIGR4 |
50 |
100 |
0.51 |
| comGE/cglE | Streptococcus mitis NCTC 12261 |
48.98 |
100 |
0.5 |
| comGE/cglE | Streptococcus mitis SK321 |
48.98 |
100 |
0.5 |
| comYE | Streptococcus mutans UA140 |
37.5 |
100 |
0.375 |
| comYE | Streptococcus mutans UA159 |
37.5 |
100 |
0.375 |