Detailed information    

insolico Bioinformatically predicted

Overview


Name   stkP   Type   Regulator
Locus tag   S101441_RS09085 Genome accession   NZ_CP021507
Coordinates   1743277..1745223 (+) Length   648 a.a.
NCBI ID   WP_069837505.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain SRCM101441     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context


Location: 1738277..1750223
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101441_RS09060 (S101441_01837) def 1738647..1739129 (+) 483 WP_014479759.1 peptide deformylase -
  S101441_RS09065 (S101441_01838) fmt 1739134..1740087 (+) 954 WP_014479760.1 methionyl-tRNA formyltransferase -
  S101441_RS09070 (S101441_01839) rsmB 1740074..1741417 (+) 1344 WP_015252111.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  S101441_RS09075 (S101441_01840) rlmN 1741421..1742512 (+) 1092 WP_069837503.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  S101441_RS09080 (S101441_01841) prpC 1742519..1743283 (+) 765 WP_069837504.1 protein-serine/threonine phosphatase PrpC -
  S101441_RS09085 (S101441_01842) stkP 1743277..1745223 (+) 1947 WP_069837505.1 serine/threonine protein kinase PrkC Regulator
  S101441_RS09090 (S101441_01843) rsgA 1745238..1746134 (+) 897 WP_003232060.1 ribosome small subunit-dependent GTPase A -
  S101441_RS09095 (S101441_01844) rpe 1746139..1746792 (+) 654 WP_003232058.1 ribulose-phosphate 3-epimerase -
  S101441_RS09100 (S101441_01845) thiN 1746865..1747509 (+) 645 WP_014479765.1 thiamine diphosphokinase -
  S101441_RS09105 spoVM 1747581..1747661 (+) 81 WP_003221545.1 stage V sporulation protein SpoVM -
  S101441_RS09110 (S101441_01846) rpmB 1747734..1747922 (-) 189 WP_003221548.1 50S ribosomal protein L28 -
  S101441_RS09115 (S101441_01847) yloU 1748199..1748561 (+) 363 WP_003232054.1 Asp23/Gls24 family envelope stress response protein -

Sequence


Protein


Download         Length: 648 a.a.        Molecular weight: 71920.59 Da        Isoelectric Point: 4.8182

>NTDB_id=193653 S101441_RS09085 WP_069837505.1 1743277..1745223(+) (stkP) [Bacillus subtilis subsp. subtilis strain SRCM101441]
MLIGKRISGRYQILRVIGGGGMANVYLAEDIILDREVAIKILRFDYANDNEFIRRFRREAQSASSLDHPNIVSIYDLGEE
DDIYYIVMEYVEGMTLKEYITANGPLHPKEALNIMEQIVSAIAHAHQNQIVHRDIKPHNILIDHMGNIKVTDFGIATALS
STTITHTNSVLGSVHYLSPEQARGGLATKKSDIYALGIVLFELLTGRIPFDGESAVSIALKHLQAETPSAKRWNPSVPQS
VENIILKATAKDPFHRYETAEDMEADIKTAFDADRLNEKRFTIQEDEEMTKAIPIIKDEELAKAAGEKEAEVTTAQENKT
KKNGKRKKWPWVLLTICLVFITAGILAVTVFPSLFMPKDVKIPDVSGMEYEKAAGHLEKEGLQVDSEVLEISDEKIEEGL
MVKTDPKADTTVKEGATVTLYKSTGKAKTEIGDVTGQTVDQAKKALKDQGFKHVTVNEVNDEKNAGTVIDQNPSAGTELV
LSEDQVKLTVSIGPEDITLRDLKTYSKEAASGYLEDNGLKLVEKEAYSDDVPEGQVVKQKPAAGTAVKPGNEVEVTFSLG
PEKKPAKTVKEKVKIPYEPENEGDELQVQIAVDDADHSISDTYEEFKIKEPTERTIELKIEPGQKGYYQVMVNNKVVSYK
TIEYPKDE

Nucleotide


Download         Length: 1947 bp        

>NTDB_id=193653 S101441_RS09085 WP_069837505.1 1743277..1745223(+) (stkP) [Bacillus subtilis subsp. subtilis strain SRCM101441]
GTGCTAATCGGCAAGCGGATCAGCGGGCGTTACCAAATTCTCCGCGTTATAGGCGGCGGGGGAATGGCCAACGTGTATTT
AGCTGAGGATATCATTCTAGACCGTGAAGTCGCAATTAAAATCCTGCGGTTTGACTATGCAAATGACAATGAATTTATCA
GACGTTTCCGCAGAGAAGCCCAATCCGCATCAAGCCTCGATCACCCGAATATTGTCAGCATTTACGATTTGGGCGAGGAA
GATGATATTTATTATATTGTCATGGAATACGTTGAAGGCATGACGCTTAAAGAATACATAACAGCAAATGGGCCGCTTCA
CCCTAAAGAAGCGCTGAACATCATGGAGCAAATTGTCTCAGCCATCGCTCATGCCCATCAAAACCAGATTGTTCACAGAG
ACATCAAGCCGCATAACATTTTGATTGATCATATGGGAAATATCAAAGTGACGGATTTTGGAATTGCGACGGCACTAAGT
TCGACCACAATCACCCATACCAATTCAGTTCTGGGCTCGGTCCATTACTTATCACCTGAACAGGCCCGGGGCGGCTTAGC
CACAAAAAAATCAGATATTTATGCGCTTGGAATCGTTCTATTTGAGCTTTTAACCGGCCGTATTCCGTTTGATGGAGAGT
CAGCAGTCAGCATCGCCTTGAAGCATCTTCAAGCGGAAACTCCTTCGGCAAAAAGGTGGAATCCATCGGTCCCCCAAAGC
GTTGAAAACATCATACTCAAGGCAACTGCCAAAGATCCGTTTCATCGCTATGAAACGGCTGAAGACATGGAAGCAGACAT
AAAAACAGCTTTTGATGCCGACAGACTCAATGAAAAGAGATTTACGATTCAAGAAGATGAAGAAATGACAAAAGCGATAC
CTATCATTAAAGATGAAGAACTCGCTAAAGCTGCTGGCGAAAAAGAAGCTGAAGTGACAACCGCACAAGAAAACAAAACA
AAGAAGAACGGCAAAAGAAAAAAGTGGCCGTGGGTTTTGCTCACGATATGCCTTGTTTTTATCACAGCTGGAATTCTTGC
TGTCACTGTTTTTCCGTCGCTTTTCATGCCTAAGGATGTCAAAATACCTGATGTCTCCGGAATGGAATACGAAAAAGCCG
CAGGGCACTTGGAAAAAGAAGGTTTACAGGTTGATTCCGAGGTGTTGGAAATCTCAGATGAAAAAATTGAAGAGGGCCTG
ATGGTAAAAACGGACCCTAAAGCGGATACAACAGTCAAAGAAGGCGCCACGGTCACTCTTTATAAAAGCACCGGAAAGGC
AAAAACGGAGATCGGTGATGTGACAGGCCAAACGGTCGACCAGGCAAAAAAAGCGTTGAAGGACCAAGGGTTTAAACATG
TAACGGTAAATGAAGTGAATGACGAGAAAAACGCGGGAACTGTCATTGACCAAAATCCTTCAGCAGGGACTGAGCTTGTC
CTGAGTGAAGATCAAGTCAAACTTACAGTCAGTATCGGACCCGAAGACATTACACTTAGAGACTTGAAAACCTACAGTAA
AGAAGCGGCGTCTGGATATCTGGAAGACAACGGATTGAAGCTTGTAGAAAAAGAAGCATACTCAGATGATGTTCCAGAAG
GACAGGTTGTCAAACAAAAACCAGCAGCAGGTACGGCAGTAAAGCCGGGAAACGAAGTTGAAGTGACATTCTCTCTCGGA
CCAGAGAAAAAACCTGCGAAAACAGTGAAAGAAAAGGTCAAGATCCCCTATGAACCAGAAAATGAAGGGGACGAGCTTCA
AGTGCAAATCGCGGTTGACGATGCTGATCACAGCATCTCTGACACTTACGAAGAATTTAAGATAAAAGAGCCGACTGAAC
GAACGATCGAACTAAAGATTGAACCCGGCCAAAAAGGGTACTATCAAGTAATGGTAAACAATAAAGTTGTCAGCTACAAA
ACCATTGAGTATCCGAAAGATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

40.862

89.506

0.366

  stkP Streptococcus pneumoniae D39

40.69

89.506

0.364

  stkP Streptococcus pneumoniae R6

40.69

89.506

0.364

  stkP Streptococcus pneumoniae Rx1

40.517

89.506

0.363


Multiple sequence alignment