Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   BC359_RS07210 Genome accession   NZ_CP016790
Coordinates   1398564..1399802 (+) Length   412 a.a.
NCBI ID   WP_061785730.1    Uniprot ID   A0A0V8JSE8
Organism   Priestia flexa strain KLBMP 4941     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1393564..1404802
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BC359_RS07185 (BC359_07155) ymfI 1394680..1395405 (+) 726 WP_078989381.1 elongation factor P 5-aminopentanone reductase -
  BC359_RS07190 (BC359_07160) - 1395472..1395732 (+) 261 WP_061785726.1 DUF3243 domain-containing protein -
  BC359_RS07195 (BC359_07165) - 1396112..1396918 (+) 807 WP_090752669.1 DUF3388 domain-containing protein -
  BC359_RS07200 (BC359_07170) - 1396931..1397878 (+) 948 WP_225002363.1 helix-turn-helix domain-containing protein -
  BC359_RS07205 (BC359_07175) pgsA 1397966..1398550 (+) 585 WP_025908595.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  BC359_RS07210 (BC359_07180) cinA 1398564..1399802 (+) 1239 WP_061785730.1 competence/damage-inducible protein A Machinery gene
  BC359_RS07215 (BC359_07185) recA 1400054..1401091 (+) 1038 WP_025908597.1 recombinase RecA Machinery gene
  BC359_RS07220 (BC359_07190) rny 1401373..1402932 (+) 1560 WP_025908598.1 ribonuclease Y -
  BC359_RS07225 (BC359_07195) - 1402992..1403789 (+) 798 WP_025908599.1 TIGR00282 family metallophosphoesterase -
  BC359_RS07230 (BC359_07200) spoVS 1404024..1404284 (+) 261 WP_003181955.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 45010.32 Da        Isoelectric Point: 4.9423

>NTDB_id=192267 BC359_RS07210 WP_061785730.1 1398564..1399802(+) (cinA) [Priestia flexa strain KLBMP 4941]
MNAEIIGVGSELLLGQIANTNAQYLSKKFAELGINVYYHTVVGDNESRLKEAILTAKKRADLIVFTGGLGPTKDDLTKET
IASELGVSLVTDQQALESIEAYFEKTNRTMTPNNRKQAIVLEGATILPNDYGMAPGMGITVRGIHYMLFPGPPKELYPMY
ESYGQAYLAEKLDMKEQIESRVLRFFGIGESQLETDIEDLLDAQTNPTIAPLAADGEVTLRLTAKHGDVVEAHRMLDEVE
KQIMSRVGEFFYGYDMTSLQAELIATMREQEVTVASAESLTGGLFSGTLTSIPGAGDVVKGSIVAYHTEVKHNVLHVAKE
TLEQDGAVSERCAEEMAVGVKKLTGSDVGISFTGVAGPSKQEGKEVGTVYIGIAFKNEKTRVYSLKLTGSRDGIRKRTVN
YGIYYLLQLLKQ

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=192267 BC359_RS07210 WP_061785730.1 1398564..1399802(+) (cinA) [Priestia flexa strain KLBMP 4941]
ATGAACGCGGAAATTATTGGAGTAGGTTCAGAGCTTTTGCTAGGCCAAATTGCCAATACAAACGCGCAATACCTATCTAA
AAAGTTTGCAGAGCTTGGTATTAACGTATATTATCATACGGTAGTTGGCGATAATGAAAGCCGATTGAAAGAAGCAATTT
TGACCGCCAAAAAACGTGCGGATTTGATTGTGTTTACAGGTGGGCTTGGGCCAACCAAAGATGACCTTACAAAAGAAACA
ATTGCTTCAGAACTAGGTGTCTCACTTGTAACAGATCAGCAAGCGCTTGAAAGTATCGAAGCGTATTTCGAAAAAACGAA
TCGGACAATGACGCCTAATAATAGGAAGCAAGCAATTGTACTTGAAGGTGCAACAATACTGCCAAACGATTATGGAATGG
CACCAGGAATGGGCATTACGGTGCGTGGTATTCACTACATGTTATTTCCTGGTCCACCAAAGGAACTTTACCCTATGTAT
GAATCGTATGGACAAGCATATTTAGCAGAAAAGCTAGATATGAAAGAGCAAATTGAATCTCGCGTTTTACGTTTCTTTGG
AATTGGAGAGTCTCAGTTAGAAACAGATATTGAGGATTTATTAGATGCACAAACAAACCCAACCATTGCGCCGTTAGCTG
CTGATGGAGAAGTAACGCTTCGCTTAACGGCTAAGCATGGAGATGTGGTTGAGGCTCATCGAATGCTTGATGAAGTAGAA
AAGCAGATTATGAGCCGTGTAGGAGAGTTTTTCTACGGATACGATATGACATCTCTACAGGCTGAACTCATTGCTACAAT
GCGAGAGCAAGAAGTGACCGTTGCTTCAGCTGAAAGTTTAACTGGCGGATTGTTTAGTGGGACGCTAACGAGCATTCCTG
GAGCTGGAGATGTTGTAAAAGGTAGCATTGTTGCTTATCACACTGAGGTAAAGCACAATGTGCTACATGTAGCAAAAGAA
ACCCTAGAGCAAGACGGGGCAGTTAGCGAGAGATGCGCAGAAGAAATGGCTGTTGGTGTGAAAAAGCTGACAGGCTCTGA
TGTTGGTATTAGCTTTACAGGCGTCGCTGGTCCGTCTAAGCAAGAAGGTAAAGAAGTTGGTACAGTTTACATTGGTATAG
CTTTTAAAAATGAAAAAACACGCGTGTATTCGCTAAAGCTTACAGGCAGTCGTGATGGTATCCGTAAACGCACTGTGAAT
TATGGAATTTATTATCTTTTACAACTATTGAAACAGTAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(257-409)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-165)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0V8JSE8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

61.22

99.515

0.609
  cinA Streptococcus mitis SK321

46.247

100

0.464
  cinA Streptococcus pneumoniae TIGR4

46.247

100

0.464
  cinA Streptococcus mitis NCTC 12261

46.005

100

0.461
  cinA Streptococcus pneumoniae Rx1

45.763

100

0.459
  cinA Streptococcus pneumoniae R6

45.763

100

0.459
  cinA Streptococcus pneumoniae D39

45.521

100

0.456
  cinA Streptococcus mutans UA159

44.686

100

0.449

Multiple sequence alignment