Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | A6A10_RS09540 | Genome accession | NZ_CP016604 |
| Coordinates | 2011810..2012157 (-) | Length | 115 a.a. |
| NCBI ID | WP_121123725.1 | Uniprot ID | A0A420XFI7 |
| Organism | Otariodibacter oris strain Baika1 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2006810..2017157
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6A10_RS09515 (A6A10_09505) | - | 2006881..2008743 (-) | 1863 | WP_121123715.1 | SLC13 family permease | - |
| A6A10_RS09520 (A6A10_09510) | ccmI | 2008812..2009714 (-) | 903 | WP_121123717.1 | c-type cytochrome biogenesis protein CcmI | - |
| A6A10_RS09525 (A6A10_09515) | - | 2009717..2010187 (-) | 471 | WP_121123719.1 | cytochrome c-type biogenesis protein | - |
| A6A10_RS09530 (A6A10_09520) | - | 2010192..2010731 (-) | 540 | WP_121123721.1 | DsbE family thiol:disulfide interchange protein | - |
| A6A10_RS09535 (A6A10_09525) | asd | 2010805..2011698 (-) | 894 | WP_121123723.1 | archaetidylserine decarboxylase | - |
| A6A10_RS09540 (A6A10_09530) | comEA/comE1 | 2011810..2012157 (-) | 348 | WP_121123725.1 | ComEA family DNA-binding protein | Machinery gene |
| A6A10_RS09545 (A6A10_09535) | - | 2012485..2013681 (+) | 1197 | WP_121123727.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| A6A10_RS09550 (A6A10_09540) | - | 2013756..2014178 (+) | 423 | WP_121123729.1 | MliC family protein | - |
| A6A10_RS09555 (A6A10_09545) | waaF | 2014180..2015238 (+) | 1059 | WP_121123731.1 | lipopolysaccharide heptosyltransferase II | - |
| A6A10_RS09560 (A6A10_09550) | rfaC | 2015219..2016184 (+) | 966 | WP_121123733.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| A6A10_RS09565 (A6A10_09555) | - | 2016381..2017052 (-) | 672 | WP_121123735.1 | phosphoglycolate phosphatase | - |
Sequence
Protein
Download Length: 115 a.a. Molecular weight: 12584.60 Da Isoelectric Point: 9.9839
>NTDB_id=189593 A6A10_RS09540 WP_121123725.1 2011810..2012157(-) (comEA/comE1) [Otariodibacter oris strain Baika1]
MKKITRYVLSLLFCSYAAVSVAKDTPKLDIAKSKAEIHTISEASKKNINPNVVNINTATVAEIQDKLVGIGTKKAQAIVE
YRENNGQFLAVEQITEVSGIGPATLDKNRDRIILK
MKKITRYVLSLLFCSYAAVSVAKDTPKLDIAKSKAEIHTISEASKKNINPNVVNINTATVAEIQDKLVGIGTKKAQAIVE
YRENNGQFLAVEQITEVSGIGPATLDKNRDRIILK
Nucleotide
Download Length: 348 bp
>NTDB_id=189593 A6A10_RS09540 WP_121123725.1 2011810..2012157(-) (comEA/comE1) [Otariodibacter oris strain Baika1]
ATGAAAAAAATCACACGCTATGTATTAAGTTTATTATTTTGTTCTTACGCAGCTGTTTCCGTTGCTAAAGATACTCCAAA
GTTGGATATTGCCAAATCAAAAGCAGAAATACATACAATAAGTGAAGCGAGCAAGAAAAATATAAATCCAAATGTGGTGA
ATATTAATACTGCTACAGTTGCGGAAATTCAAGATAAGTTGGTAGGTATTGGTACTAAAAAAGCACAAGCGATAGTGGAA
TATCGTGAAAATAATGGACAATTTTTAGCTGTGGAACAAATTACCGAAGTCTCAGGTATTGGACCTGCTACATTGGACAA
AAATCGTGATCGTATTATTCTAAAATAA
ATGAAAAAAATCACACGCTATGTATTAAGTTTATTATTTTGTTCTTACGCAGCTGTTTCCGTTGCTAAAGATACTCCAAA
GTTGGATATTGCCAAATCAAAAGCAGAAATACATACAATAAGTGAAGCGAGCAAGAAAAATATAAATCCAAATGTGGTGA
ATATTAATACTGCTACAGTTGCGGAAATTCAAGATAAGTTGGTAGGTATTGGTACTAAAAAAGCACAAGCGATAGTGGAA
TATCGTGAAAATAATGGACAATTTTTAGCTGTGGAACAAATTACCGAAGTCTCAGGTATTGGACCTGCTACATTGGACAA
AAATCGTGATCGTATTATTCTAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
57.391 |
100 |
0.574 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
47.706 |
94.783 |
0.452 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
41.284 |
94.783 |
0.391 |