Detailed information NTG0189596

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: A6A11_RS00255
• Genome accession: NZ_CP016605
• Coordinates: 51418..52527 (-)
• Length: 369 a.a.
• NCBI ID: WP_132024820.1
• Uniprot ID: A0A4R2MUG8
• Organism: Bisgaardia hudsonensis strain M327/99/2
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 46418..57527

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6A11_RS00230 (A6A11_00230)	cyaY	47347..47658 (-)	312	WP_132024812.1	iron donor protein CyaY	-
A6A11_RS00235	lptM	47780..47896 (+)	117	WP_132024814.1	LPS translocon maturation chaperone LptM	-
A6A11_RS00240 (A6A11_00235)	lysA	47912..49162 (+)	1251	WP_132024816.1	diaminopimelate decarboxylase	-
A6A11_RS00245 (A6A11_00240)	ftsY	49210..50697 (-)	1488	WP_176672777.1	signal recognition particle-docking protein FtsY	-
A6A11_RS00250 (A6A11_00245)	rsmD	50808..51416 (+)	609	WP_132024818.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
A6A11_RS00255 (A6A11_00250)	dprA	51418..52527 (-)	1110	WP_132024820.1	DNA-processing protein DprA	Machinery gene
A6A11_RS00260 (A6A11_00255)	mioC	52687..53130 (-)	444	WP_132024822.1	FMN-binding protein MioC	-
A6A11_RS00265 (A6A11_00260)	-	53187..53405 (-)	219	WP_132024824.1	cell division protein ZapB	-
A6A11_RS00270 (A6A11_00265)	glpX	53614..54627 (+)	1014	WP_132024826.1	class II fructose-bisphosphatase	-
A6A11_RS00275 (A6A11_00270)	gyrB	54793..57216 (+)	2424	WP_132024828.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41860.04 Da
• Isoelectric Point: 5.8380

>NTDB_id=189596 A6A11_RS00255 WP_132024820.1 51418..52527(-) (dprA) [Bisgaardia hudsonensis strain M327/99/2]
MNKSNEIILRLQQIPRLGVNSINKILNEITLETLIQYDQEKLKAIGWTTTQIHRWFNPEMRYIQPALEWEAKENNHTIIN
LYDENYPYLLKQIATPPLLLFVKGNIDALKQQQIAIVGSRSCSNYGEYWAKYFATELSLAGFIITSGLALGIDAFSHQAV
VNIKGQTIAVLGSGLEHIYPKKHKKLSQEIIDHNGCIISEFLPNQPPIAQHFPQRNRIISGLSLATLIIEASERSGSLIT
ARYALEQNRDIFALPGNIQNKYSEGCHRLIKQGAMLVENTEDILENLSLFGVNNYLPKKPQNLLIDYDGPTPPEEPNYPE
LYQHIGYTPISLDDLALKTSLSIDILLTQLLELELQDLVITEQGLYRRT

Nucleotide

• Length: 1110 bp

>NTDB_id=189596 A6A11_RS00255 WP_132024820.1 51418..52527(-) (dprA) [Bisgaardia hudsonensis strain M327/99/2]
ATGAATAAATCAAATGAAATTATTTTACGATTACAACAAATTCCTAGATTGGGGGTAAATAGCATTAATAAAATTCTCAA
TGAAATTACATTAGAAACGCTAATACAATATGATCAAGAGAAACTAAAAGCTATTGGATGGACTACAACACAAATCCATC
GCTGGTTTAATCCAGAAATGCGATATATTCAACCAGCATTAGAATGGGAAGCTAAAGAAAACAATCATACTATTATTAAT
TTATATGATGAAAATTATCCCTATTTATTAAAACAAATCGCTACACCACCACTATTATTATTTGTTAAAGGAAATATAGA
TGCCTTAAAACAACAACAAATCGCAATAGTAGGTAGTCGTTCCTGTTCAAATTATGGAGAATACTGGGCAAAATATTTTG
CTACAGAACTAAGTCTAGCAGGATTTATTATTACCAGTGGCTTAGCGTTAGGTATTGACGCTTTTAGTCATCAAGCCGTA
GTTAATATAAAAGGACAAACTATTGCCGTATTAGGAAGTGGTTTAGAACATATTTATCCCAAAAAACATAAGAAACTTTC
TCAAGAAATTATAGATCATAATGGTTGCATTATTTCCGAATTTTTACCTAACCAGCCACCAATAGCACAACATTTTCCTC
AAAGAAATCGAATTATCAGCGGACTCTCCCTTGCAACCTTAATTATTGAAGCTAGCGAACGAAGTGGTTCACTCATAACG
GCAAGATATGCCCTAGAGCAAAATAGAGATATTTTTGCATTACCAGGCAATATACAAAATAAATACAGTGAAGGTTGCCA
TAGATTAATTAAACAAGGAGCAATGTTGGTAGAAAACACCGAAGATATTTTAGAAAATCTTTCTTTATTTGGTGTAAATA
ACTATTTACCTAAAAAACCCCAAAATTTATTAATTGATTATGATGGACCAACGCCACCAGAAGAACCAAACTATCCAGAA
CTGTACCAACATATAGGTTATACCCCTATTAGTTTAGATGATTTAGCCCTAAAAACATCGTTATCAATAGATATATTACT
AACCCAACTACTCGAATTGGAATTACAAGATTTAGTGATTACAGAACAGGGATTATATCGCCGAACTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (72-278)

• DprA winged helix domain (DprA_WH) (310-362)

3D structure

• AlphaFold DB: A0A4R2MUG8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	61.23	100	0.621
dprA	Glaesserella parasuis strain SC1401	50.862	94.309	0.48
dprA	Vibrio campbellii strain DS40M4	42.7	98.374	0.42
dprA	Legionella pneumophila strain ERS1305867	40.164	99.187	0.398
dprA	Vibrio cholerae strain A1552	40.056	96.748	0.388