Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | BBP08_RS00860 | Genome accession | NZ_CP016501 |
| Coordinates | 164589..165179 (+) | Length | 196 a.a. |
| NCBI ID | WP_000613483.1 | Uniprot ID | A0AAV3JHA0 |
| Organism | Streptococcus agalactiae strain WC1535 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 159589..170179
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BBP08_RS00840 (BBP08_00775) | - | 160347..161699 (+) | 1353 | WP_000427463.1 | APC family permease | - |
| BBP08_RS00845 (BBP08_00780) | - | 161872..162420 (+) | 549 | WP_001019793.1 | tRNA (cytidine(34)-2'-O)-methyltransferase | - |
| BBP08_RS00850 (BBP08_00785) | - | 162556..163725 (+) | 1170 | WP_000634087.1 | MalY/PatB family protein | - |
| BBP08_RS00855 (BBP08_00790) | upp | 163835..164464 (+) | 630 | WP_000514490.1 | uracil phosphoribosyltransferase | - |
| BBP08_RS00860 (BBP08_00795) | clpP | 164589..165179 (+) | 591 | WP_000613483.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| BBP08_RS00865 (BBP08_00800) | - | 165279..165524 (+) | 246 | WP_001041186.1 | DUF2129 domain-containing protein | - |
| BBP08_RS00870 (BBP08_00805) | - | 165679..166845 (+) | 1167 | WP_000415515.1 | ABC transporter substrate-binding protein | - |
| BBP08_RS00875 (BBP08_00810) | - | 166951..167820 (+) | 870 | WP_000941400.1 | branched-chain amino acid ABC transporter permease | - |
| BBP08_RS00880 (BBP08_00815) | - | 167823..168776 (+) | 954 | WP_000662323.1 | branched-chain amino acid ABC transporter permease | - |
| BBP08_RS00885 (BBP08_00820) | - | 168777..169541 (+) | 765 | WP_001185981.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21550.52 Da Isoelectric Point: 4.5933
>NTDB_id=188611 BBP08_RS00860 WP_000613483.1 164589..165179(+) (clpP) [Streptococcus agalactiae strain WC1535]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGQVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQSDMAIAAEHLLKTRHTLEKILADNSGQ
SIEKVHDDAERDRWMSAQETLDYGFIDAIMENNNLQ
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGQVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQSDMAIAAEHLLKTRHTLEKILADNSGQ
SIEKVHDDAERDRWMSAQETLDYGFIDAIMENNNLQ
Nucleotide
Download Length: 591 bp
>NTDB_id=188611 BBP08_RS00860 WP_000613483.1 164589..165179(+) (clpP) [Streptococcus agalactiae strain WC1535]
ATGATTCCAGTAGTTATTGAACAAACAAGTCGTGGTGAACGTTCTTATGATATTTACTCACGTCTTTTAAAAGATCGTAT
TATTATGTTGACAGGCCAAGTTGAGGATAATATGGCCAATAGTATCATTGCACAGTTATTGTTTCTCGATGCACAAGATA
ATACAAAGGATATTTACCTTTATGTCAATACACCAGGTGGTTCAGTATCGGCTGGACTTGCTATTGTGGACACCATGAAC
TTCATTAAATCGGACGTACAGACGATTGTTATGGGGATGGCTGCTTCGATGGGAACCATTATTGCTTCAAGTGGTGCTAA
AGGAAAACGTTTTATGTTACCGAATGCAGAATATATGATCCACCAACCAATGGGCGGAACAGGCGGAGGTACACAGCAAT
CTGATATGGCTATCGCTGCTGAGCATCTTTTAAAAACGCGTCATACTTTAGAAAAAATCTTAGCTGATAATTCTGGTCAA
TCTATTGAAAAAGTCCATGATGATGCAGAGCGTGATCGTTGGATGAGTGCTCAAGAAACACTTGATTATGGCTTTATTGA
TGCTATTATGGAAAATAATAATTTACAATAA
ATGATTCCAGTAGTTATTGAACAAACAAGTCGTGGTGAACGTTCTTATGATATTTACTCACGTCTTTTAAAAGATCGTAT
TATTATGTTGACAGGCCAAGTTGAGGATAATATGGCCAATAGTATCATTGCACAGTTATTGTTTCTCGATGCACAAGATA
ATACAAAGGATATTTACCTTTATGTCAATACACCAGGTGGTTCAGTATCGGCTGGACTTGCTATTGTGGACACCATGAAC
TTCATTAAATCGGACGTACAGACGATTGTTATGGGGATGGCTGCTTCGATGGGAACCATTATTGCTTCAAGTGGTGCTAA
AGGAAAACGTTTTATGTTACCGAATGCAGAATATATGATCCACCAACCAATGGGCGGAACAGGCGGAGGTACACAGCAAT
CTGATATGGCTATCGCTGCTGAGCATCTTTTAAAAACGCGTCATACTTTAGAAAAAATCTTAGCTGATAATTCTGGTCAA
TCTATTGAAAAAGTCCATGATGATGCAGAGCGTGATCGTTGGATGAGTGCTCAAGAAACACTTGATTATGGCTTTATTGA
TGCTATTATGGAAAATAATAATTTACAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
92.347 |
100 |
0.923 |
| clpP | Streptococcus thermophilus LMD-9 |
92.347 |
100 |
0.923 |
| clpP | Streptococcus pneumoniae Rx1 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae D39 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae R6 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae TIGR4 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pyogenes JRS4 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus pyogenes MGAS315 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus mutans UA159 |
88.776 |
100 |
0.888 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
85.204 |
100 |
0.852 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
84.694 |
100 |
0.847 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.031 |
98.469 |
0.571 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
57.895 |
96.939 |
0.561 |