Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | BBD27_RS02545 | Genome accession | NZ_CP016394 |
| Coordinates | 486267..486857 (-) | Length | 196 a.a. |
| NCBI ID | WP_002949732.1 | Uniprot ID | Q5M5U4 |
| Organism | Streptococcus thermophilus strain ND07 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 481267..491857
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BBD27_RS02515 (BBD27_0500) | - | 481476..482240 (-) | 765 | WP_002949740.1 | ABC transporter ATP-binding protein | - |
| BBD27_RS02520 (BBD27_0501) | - | 482243..483193 (-) | 951 | WP_011225510.1 | branched-chain amino acid ABC transporter permease | - |
| BBD27_RS02525 (BBD27_0502) | - | 483197..484081 (-) | 885 | WP_011225509.1 | branched-chain amino acid ABC transporter permease | - |
| BBD27_RS02530 (BBD27_0503) | - | 484125..485300 (-) | 1176 | WP_011680765.1 | ABC transporter substrate-binding protein | - |
| BBD27_RS02535 (BBD27_0504) | - | 485457..485738 (-) | 282 | WP_002949736.1 | YlbG family protein | - |
| BBD27_RS02540 (BBD27_0505) | - | 485731..486180 (-) | 450 | WP_011680764.1 | YlbF family regulator | - |
| BBD27_RS02545 (BBD27_0506) | clpP | 486267..486857 (-) | 591 | WP_002949732.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| BBD27_RS02550 (BBD27_0507) | upp | 486995..487624 (-) | 630 | WP_002946740.1 | uracil phosphoribosyltransferase | - |
| BBD27_RS02555 (BBD27_0508) | - | 487754..488029 (-) | 276 | WP_024704192.1 | hypothetical protein | - |
| BBD27_RS02560 (BBD27_0509) | - | 488070..488237 (-) | 168 | WP_011680762.1 | hypothetical protein | - |
| BBD27_RS02565 (BBD27_0510) | - | 488313..489476 (-) | 1164 | WP_011680761.1 | MalY/PatB family protein | - |
| BBD27_RS02570 (BBD27_0511) | - | 489487..490581 (-) | 1095 | WP_002946733.1 | cystathionine gamma-synthase | - |
| BBD27_RS02575 (BBD27_0512) | - | 490885..491478 (-) | 594 | Protein_497 | cation transporting ATPase C-terminal domain-containing protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21577.62 Da Isoelectric Point: 4.4829
>NTDB_id=187825 BBD27_RS02545 WP_002949732.1 486267..486857(-) (clpP) [Streptococcus thermophilus strain ND07]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
Nucleotide
Download Length: 591 bp
>NTDB_id=187825 BBD27_RS02545 WP_002949732.1 486267..486857(-) (clpP) [Streptococcus thermophilus strain ND07]
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGTACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATATGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCAATTGAAAAGGTTCATGTCGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGTACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATATGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCAATTGAAAAGGTTCATGTCGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
100 |
100 |
1 |
| clpP | Streptococcus thermophilus LMD-9 |
100 |
100 |
1 |
| clpP | Streptococcus pneumoniae D39 |
92.821 |
99.49 |
0.923 |
| clpP | Streptococcus pneumoniae R6 |
92.821 |
99.49 |
0.923 |
| clpP | Streptococcus pneumoniae TIGR4 |
92.821 |
99.49 |
0.923 |
| clpP | Streptococcus pneumoniae Rx1 |
92.821 |
99.49 |
0.923 |
| clpP | Streptococcus pyogenes MGAS315 |
89.796 |
100 |
0.898 |
| clpP | Streptococcus pyogenes JRS4 |
89.796 |
100 |
0.898 |
| clpP | Streptococcus mutans UA159 |
87.755 |
100 |
0.878 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
87.245 |
100 |
0.872 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
86.735 |
100 |
0.867 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
59.184 |
100 |
0.592 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.549 |
98.469 |
0.577 |