Detailed information NTG0186833

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: B4V05_RS02770
• Genome accession: NZ_CP020459
• Coordinates: 547418..548002 (-)
• Length: 194 a.a.
• NCBI ID: WP_004265909.1
• Uniprot ID: A0A0B2XKX5
• Organism: Latilactobacillus sakei strain FAM18311
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 542418..553002

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B4V05_RS02740 (B4V05_02730)	-	542484..543020 (+)	537	WP_056948812.1	HdeD family acid-resistance protein	-
B4V05_RS02745 (B4V05_02735)	rapZ	543146..544030 (+)	885	WP_076632190.1	RNase adapter RapZ	-
B4V05_RS02750 (B4V05_02740)	-	544027..545061 (+)	1035	WP_076632189.1	gluconeogenesis factor YvcK family protein	-
B4V05_RS02755 (B4V05_02745)	whiA	545064..546008 (+)	945	WP_076632188.1	DNA-binding protein WhiA	-
B4V05_RS02760 (B4V05_02750)	-	546101..546556 (+)	456	WP_011374237.1	MarR family winged helix-turn-helix transcriptional regulator	-
B4V05_RS02765 (B4V05_02755)	-	546670..547194 (-)	525	WP_011374238.1	DsbA family protein	-
B4V05_RS02770 (B4V05_02760)	clpP	547418..548002 (-)	585	WP_004265909.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
B4V05_RS02775 (B4V05_02765)	-	548545..549126 (-)	582	WP_157769669.1	glycoside hydrolase family 73 protein	-
B4V05_RS02780 (B4V05_02770)	-	549342..550301 (+)	960	WP_076632187.1	nucleoside hydrolase	-

Sequence

Protein

• Length: 194 a.a.
• Molecular weight: 21258.30 Da
• Isoelectric Point: 4.6805

>NTDB_id=186833 B4V05_RS02770 WP_004265909.1 547418..548002(-) (clpP) [Latilactobacillus sakei strain FAM18311]
MLVPTVIEQTSRGERAYDIYSRLLKDRIIMLSGEVNDQMANTIIAQLLFLDAQDSDKDISIYINSPGGSVTAGLAIMDTM
NFIKSDVQTIAMGMAASMASVLLSAGTKGKRFALPNSTVLIHQPLGGAQGQQTEIEIAAREILKTRKRLNQILADNSGQT
FEKLQADTDRDNYMTAQEAKDYGLIDDIMVNQPK

Nucleotide

• Length: 585 bp

>NTDB_id=186833 B4V05_RS02770 WP_004265909.1 547418..548002(-) (clpP) [Latilactobacillus sakei strain FAM18311]
ATGTTAGTACCGACAGTTATCGAACAAACATCTCGTGGCGAACGCGCCTACGATATTTATTCTCGTCTATTAAAAGACCG
GATCATCATGTTATCTGGTGAAGTAAACGACCAAATGGCTAACACAATCATTGCGCAATTACTATTCTTAGATGCGCAAG
ATTCAGATAAGGATATTTCAATCTACATCAACTCACCTGGTGGTTCTGTGACAGCCGGTTTGGCTATCATGGACACAATG
AACTTCATCAAATCTGACGTTCAAACCATCGCTATGGGGATGGCTGCTTCAATGGCCAGCGTTTTACTTTCAGCTGGGAC
AAAAGGCAAACGTTTTGCATTGCCTAACTCAACAGTCTTGATTCACCAACCTTTAGGTGGTGCACAAGGCCAACAAACTG
AAATTGAAATCGCTGCTCGCGAAATCTTGAAGACCCGGAAACGCTTGAACCAAATCTTGGCAGACAATTCCGGCCAAACA
TTCGAAAAATTACAAGCAGACACTGATCGTGATAACTACATGACAGCCCAAGAAGCAAAAGATTACGGTTTGATTGACGA
CATTATGGTTAACCAACCAAAATAG

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (12-191)

3D structure

• AlphaFold DB: A0A0B2XKX5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Lactococcus lactis subsp. cremoris KW2	70.833	98.969	0.701
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	68.75	98.969	0.68
clpP	Streptococcus thermophilus LMG 18311	68.229	98.969	0.675
clpP	Streptococcus thermophilus LMD-9	68.229	98.969	0.675
clpP	Streptococcus pneumoniae R6	67.708	98.969	0.67
clpP	Streptococcus pneumoniae Rx1	67.708	98.969	0.67
clpP	Streptococcus pneumoniae D39	67.708	98.969	0.67
clpP	Streptococcus pneumoniae TIGR4	67.708	98.969	0.67
clpP	Streptococcus mutans UA159	66.146	98.969	0.655
clpP	Bacillus subtilis subsp. subtilis str. 168	66.842	97.938	0.655
clpP	Streptococcus pyogenes JRS4	65.104	98.969	0.644
clpP	Streptococcus pyogenes MGAS315	65.104	98.969	0.644
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.021	97.423	0.624