Detailed information    

insolico Bioinformatically predicted

Overview

Name   clpP   Type   Regulator
Locus tag   A9C19_RS02255 Genome accession   NZ_CP016020
Coordinates   484200..484796 (-) Length   198 a.a.
NCBI ID   WP_072578451.1    Uniprot ID   A0A1L3MMT6
Organism   Bacillus weihaiensis strain Alg07     
Function   degradation of ComK; degradation of DegU (predicted from homology)   
Competence regulation

Genomic Context

Location: 479200..489796
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A9C19_RS02230 (A9C19_02175) - 479944..480462 (+) 519 WP_145925769.1 8-oxo-dGTP diphosphatase -
  A9C19_RS02235 (A9C19_02180) rapZ 480586..481485 (+) 900 WP_072578447.1 RNase adapter RapZ -
  A9C19_RS02240 (A9C19_02185) - 481504..482454 (+) 951 WP_072578448.1 gluconeogenesis factor YvcK family protein -
  A9C19_RS02245 (A9C19_02190) whiA 482489..483439 (+) 951 WP_072578449.1 DNA-binding protein WhiA -
  A9C19_RS02250 (A9C19_02195) - 483684..483941 (+) 258 WP_072578450.1 HPr family phosphocarrier protein -
  A9C19_RS02255 (A9C19_02200) clpP 484200..484796 (-) 597 WP_072578451.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP Regulator
  A9C19_RS02265 (A9C19_02210) - 485472..488108 (+) 2637 WP_072578452.1 EAL domain-containing protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 21822.15 Da        Isoelectric Point: 4.7768

>NTDB_id=185291 A9C19_RS02255 WP_072578451.1 484200..484796(-) (clpP) [Bacillus weihaiensis strain Alg07]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPSVSTICIGMAASMGAFLLAAGDKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNKILSERTGQ
PIEVIEKDTDRDNFMTAERALEYGLIDKVLDRNILGNK

Nucleotide


Download         Length: 597 bp        

>NTDB_id=185291 A9C19_RS02255 WP_072578451.1 484200..484796(-) (clpP) [Bacillus weihaiensis strain Alg07]
ATGAATTTAATTCCTACAGTTATTGAACAAACAAATCGTGGTGAGCGCGCGTATGACATTTATTCTCGTCTTTTAAAAGA
CCGTATCATCATGCTTGGTAGTGCAATTGATGATAATGTAGCAAACTCTATCGTGTCTCAGCTTTTATTCTTAGAAGCAG
AAGATCCAGAGAAGGACATCTCCATTTATATTAACAGCCCTGGTGGATCAATTACAGCAGGTATGGCTATTTACGATACG
ATGCAGTTCATTAAGCCTAGCGTATCAACAATTTGTATTGGTATGGCGGCATCTATGGGTGCTTTCCTTTTAGCAGCTGG
AGATAAAGGTAAGCGTTACGCACTTCCTAACAGTGAAGTCATGATTCACCAACCATTAGGTGGAGCACAAGGTCAAGCAA
CGGAAATTGAAATTGCGGCAAAACGCATTCTTTTCCTTCGTGAAAAATTAAACAAAATCTTATCTGAACGTACTGGTCAA
CCGATCGAAGTGATCGAAAAGGATACAGATCGTGATAACTTCATGACAGCTGAGCGTGCATTAGAATATGGTTTAATCGA
CAAAGTATTAGACCGCAATATTCTTGGAAATAAATAA

Domains

Predicted by InterproScan.

Clp protease (CLP_protease)

(13-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1L3MMT6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  clpP Bacillus subtilis subsp. subtilis str. 168

92.105

95.96

0.884
  clpP Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

68.229

96.97

0.662
  clpP Streptococcus thermophilus LMG 18311

57.949

98.485

0.571
  clpP Streptococcus thermophilus LMD-9

57.949

98.485

0.571
  clpP Streptococcus mutans UA159

56.633

98.99

0.561
  clpP Streptococcus pneumoniae D39

56.923

98.485

0.561
  clpP Lactococcus lactis subsp. cremoris KW2

56.923

98.485

0.561
  clpP Streptococcus pneumoniae Rx1

56.923

98.485

0.561
  clpP Streptococcus pneumoniae R6

56.923

98.485

0.561
  clpP Streptococcus pneumoniae TIGR4

56.923

98.485

0.561
  clpP Streptococcus pyogenes MGAS315

56.41

98.485

0.556
  clpP Streptococcus pyogenes JRS4

56.41

98.485

0.556
  clpP Lactococcus lactis subsp. lactis strain DGCC12653

54.872

98.485

0.54

Multiple sequence alignment