Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   B5D85_RS06165 Genome accession   NZ_CP020082
Coordinates   1182958..1183140 (-) Length   60 a.a.
NCBI ID   WP_032463717.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain STAB120304     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1177958..1188140
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B5D85_RS06150 (B5D85_06130) - 1178396..1179091 (-) 696 WP_002983928.1 phosphoglycerate mutase -
  B5D85_RS06155 (B5D85_06135) - 1179330..1180265 (+) 936 WP_023610138.1 dihydroorotate oxidase -
  B5D85_RS06160 (B5D85_06140) - 1180565..1182427 (-) 1863 WP_076639304.1 heavy metal translocating P-type ATPase -
  B5D85_RS06165 (B5D85_06145) prx 1182958..1183140 (-) 183 WP_032463717.1 hypothetical protein Regulator
  B5D85_RS06170 (B5D85_06150) spel 1183255..1184043 (-) 789 WP_021340779.1 streptococcal pyrogenic exotoxin SpeL -
  B5D85_RS06175 (B5D85_06155) spem 1184325..1185038 (-) 714 WP_032463716.1 streptococcal pyrogenic exotoxin SpeM -
  B5D85_RS06180 (B5D85_06160) - 1185422..1185982 (-) 561 WP_011018106.1 GNAT family N-acetyltransferase -
  B5D85_RS06185 (B5D85_06165) - 1186015..1186179 (-) 165 WP_021340366.1 hypothetical protein -
  B5D85_RS06190 (B5D85_06170) - 1186328..1186969 (-) 642 Protein_1159 CHAP domain-containing protein -
  B5D85_RS06195 (B5D85_06175) - 1187082..1187774 (-) 693 WP_002994484.1 AP2 domain-containing protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6949.84 Da        Isoelectric Point: 4.0606

>NTDB_id=184601 B5D85_RS06165 WP_032463717.1 1182958..1183140(-) (prx) [Streptococcus pyogenes strain STAB120304]
MLTYDEFKQAIDDGYIVGDTVMIVRKNGQIFDYVLPHEEARNGEVVTEEKVEEVMVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=184601 B5D85_RS06165 WP_032463717.1 1182958..1183140(-) (prx) [Streptococcus pyogenes strain STAB120304]
ATGCTAACATACGACGAATTTAAGCAAGCTATTGATGACGGATATATCGTAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAGGAAGCGAGAAATGGAGAAGTTGTGACAGAGGAGAAGGTGGAAGAAG
TGATGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

96.667

0.967
  prx Streptococcus pyogenes MGAS8232

85

100

0.85
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS315

87.805

68.333

0.6
  prx Streptococcus pyogenes MGAS315

76.19

70

0.533