Detailed information NTG0182982

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: LLJM2_RS09260
• Genome accession: NZ_CP015900
• Coordinates: 1806666..1807175 (-)
• Length: 169 a.a.
• NCBI ID: WP_021165649.1
• Uniprot ID: -
• Organism: Lactococcus cremoris strain JM2
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1801666..1812175

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLJM2_RS09225 (LLJM2_1816)	-	1802105..1802632 (-)	528	WP_014572213.1	F0F1 ATP synthase subunit delta	-
LLJM2_RS09230 (LLJM2_1817)	atpF	1802634..1803140 (-)	507	WP_010906128.1	F0F1 ATP synthase subunit B	-
LLJM2_RS09235 (LLJM2_1818)	atpB	1803155..1803868 (-)	714	WP_004255255.1	F0F1 ATP synthase subunit A	-
LLJM2_RS09240 (LLJM2_1819)	-	1803915..1804130 (-)	216	WP_014572212.1	F0F1 ATP synthase subunit C	-
LLJM2_RS09245 (LLJM2_1820)	-	1804313..1805089 (-)	777	WP_014572211.1	alpha/beta hydrolase family protein	-
LLJM2_RS09250 (LLJM2_1821)	-	1805373..1805678 (-)	306	Protein_1795	ComEC/Rec2 family competence protein	-
LLJM2_RS09255 (LLJM2_03370)	-	1805699..1806589 (-)	891	WP_281634793.1	IS982-like element ISLll1 family transposase	-
LLJM2_RS09260 (LLJM2_03375)	comEC	1806666..1807175 (-)	510	WP_021165649.1	MBL fold metallo-hydrolase	Machinery gene
LLJM2_RS09265 (LLJM2_1824)	comEC	1807172..1808443 (-)	1272	WP_324187043.1	ComEC/Rec2 family competence protein	Machinery gene
LLJM2_RS09270 (LLJM2_1825)	comEA	1808571..1809017 (-)	447	WP_228763864.1	helix-hairpin-helix domain-containing protein	Machinery gene
LLJM2_RS09275 (LLJM2_1826)	-	1809283..1810644 (-)	1362	WP_081196831.1	ABC transporter permease	-
LLJM2_RS09280 (LLJM2_1827)	-	1810641..1811573 (-)	933	WP_014572202.1	ABC transporter ATP-binding protein	-
LLJM2_RS09285 (LLJM2_1828)	-	1811679..1812077 (-)	399	WP_011676775.1	hypothetical protein	-

Sequence

Protein

• Length: 169 a.a.
• Molecular weight: 18923.62 Da
• Isoelectric Point: 6.9787

>NTDB_id=182982 LLJM2_RS09260 WP_021165649.1 1806666..1807175(-) (comEC) [Lactococcus cremoris strain JM2]
MRASITAVDIGQGDSIFLQDKFNKENILIDTGGRLALPQKNWQKAQTQSNADKTLIPYLESMGVAHIDQLILTHTDADHV
GDFLSLADKIKIREIWISPGELTNISFVEKLKKAKIPIHVSKVGDKIPIFDSFLQVLSNGYTKKGDNNDSIVTYGNFYHT
KFLFTDPNC

Nucleotide

• Length: 510 bp

>NTDB_id=182982 LLJM2_RS09260 WP_021165649.1 1806666..1807175(-) (comEC) [Lactococcus cremoris strain JM2]
ATGAGAGCAAGCATTACAGCAGTTGATATCGGACAAGGAGATAGTATTTTTCTACAAGATAAGTTTAATAAAGAAAACAT
TCTGATTGATACTGGGGGACGACTTGCTCTTCCTCAAAAAAATTGGCAAAAAGCGCAGACGCAATCAAATGCTGACAAAA
CGCTTATCCCTTATTTAGAATCCATGGGGGTGGCTCATATTGACCAACTTATTCTGACTCATACAGATGCTGACCATGTT
GGCGATTTCTTGTCCTTAGCTGATAAAATAAAAATAAGAGAAATCTGGATCAGTCCGGGAGAATTAACCAACATTAGTTT
TGTGGAAAAATTAAAAAAAGCAAAAATTCCGATTCATGTTAGTAAAGTTGGGGATAAAATTCCGATTTTTGATAGTTTTC
TTCAAGTTTTATCAAATGGTTACACTAAAAAAGGGGATAATAATGATTCCATAGTGACTTATGGAAACTTTTACCATACA
AAATTTCTTTTTACAGACCCGAATTGCTAG

Domains

Predicted by InterProScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (11-99)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Lactococcus lactis subsp. cremoris KW2	98.788	97.633	0.964
comEC/celB	Streptococcus mitis SK321	46.707	98.817	0.462
comEC/celB	Streptococcus pneumoniae TIGR4	44.91	98.817	0.444
comEC/celB	Streptococcus pneumoniae Rx1	44.311	98.817	0.438
comEC/celB	Streptococcus pneumoniae D39	44.311	98.817	0.438
comEC/celB	Streptococcus pneumoniae R6	44.311	98.817	0.438
comEC/celB	Streptococcus mitis NCTC 12261	43.713	98.817	0.432
comEC	Latilactobacillus sakei subsp. sakei 23K	38.037	96.45	0.367