Detailed information NTG0182972

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LLJM2_RS05730
• Genome accession: NZ_CP015900
• Coordinates: 1098203..1099051 (+)
• Length: 282 a.a.
• NCBI ID: WP_081196627.1
• Uniprot ID: -
• Organism: Lactococcus cremoris strain JM2
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1093203..1104051

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLJM2_RS05705 (LLJM2_1103)	ilvN	1093936..1094412 (+)	477	WP_021037263.1	acetolactate synthase small subunit	-
LLJM2_RS05710 (LLJM2_1104)	ilvC	1094458..1095480 (+)	1023	WP_021211415.1	ketol-acid reductoisomerase	-
LLJM2_RS05715 (LLJM2_1105)	ilvA	1095539..1096789 (+)	1251	WP_014572605.1	threonine ammonia-lyase IlvA	-
LLJM2_RS05720 (LLJM2_1106)	budA	1096924..1097634 (+)	711	WP_011676302.1	acetolactate decarboxylase	-
LLJM2_RS05725 (LLJM2_1107)	-	1097674..1098054 (+)	381	WP_014572603.1	RidA family protein	-
LLJM2_RS05730 (LLJM2_1108)	dprA	1098203..1099051 (+)	849	WP_081196627.1	DNA-processing protein DprA	Machinery gene
LLJM2_RS05735 (LLJM2_1109)	topA	1099317..1101443 (+)	2127	WP_015082465.1	type I DNA topoisomerase	-
LLJM2_RS05740 (LLJM2_1110)	trmFO	1101515..1102861 (+)	1347	WP_081196628.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
LLJM2_RS05745 (LLJM2_1111)	xerS	1102911..1103981 (-)	1071	WP_014572599.1	tyrosine recombinase XerS	-

Sequence

Protein

• Length: 282 a.a.
• Molecular weight: 31924.12 Da
• Isoelectric Point: 9.9799

>NTDB_id=182972 LLJM2_RS05730 WP_081196627.1 1098203..1099051(+) (dprA) [Lactococcus cremoris strain JM2]
MITNFDLFRWKKAGMTNLGVNKLLKFFRKYDIKISLRQMGQVAQVKSIPNFIEQYKNQDVKKLRIDYKKFSSFSILDDLY
PERLREIYNPPVLIFYQGNIDLLKNPKLAFVGSRLAGQSGIKAVQKIITELNQSFTIVSGLAKGIDTASHLSAIKTKTPT
IAVIGTGLDIFYPLENRKIQEYLAKNQLVLSEYSLGEKPLKYHFPERNRIIAGLSRGVVVVEAKLRSGSLITCERALEEG
RDIFAIPGNIADGKSDGCNHLIQQGAKLVYQAQDILEEYLYN

Nucleotide

• Length: 849 bp

>NTDB_id=182972 LLJM2_RS05730 WP_081196627.1 1098203..1099051(+) (dprA) [Lactococcus cremoris strain JM2]
ATGATTACAAATTTTGATTTATTTCGTTGGAAAAAAGCAGGAATGACCAATCTTGGTGTAAATAAGCTCTTAAAATTTTT
CCGCAAATATGATATAAAAATAAGCTTACGACAAATGGGACAAGTGGCTCAAGTCAAATCAATCCCTAACTTTATCGAAC
AATATAAAAATCAGGACGTAAAGAAACTCAGGATAGACTATAAAAAATTTTCCTCCTTTTCCATTCTTGATGACCTTTAT
CCCGAGCGTCTAAGAGAAATCTACAACCCACCCGTTTTAATTTTTTATCAGGGAAATATTGATTTATTAAAAAATCCTAA
ACTTGCCTTTGTTGGAAGCCGCCTAGCAGGTCAATCAGGGATAAAAGCTGTCCAAAAAATTATCACAGAATTGAATCAAT
CCTTTACAATAGTAAGCGGGCTTGCTAAAGGGATTGACACAGCCAGCCATCTGTCAGCAATTAAAACTAAAACACCAACA
ATTGCTGTTATTGGTACAGGATTGGATATTTTCTATCCACTAGAAAATCGTAAAATACAGGAATATCTAGCAAAAAATCA
ATTAGTTTTAAGTGAATATTCATTAGGCGAAAAACCACTTAAATACCACTTTCCAGAGCGCAATCGAATTATTGCTGGTC
TTTCACGGGGAGTTGTTGTCGTGGAAGCAAAATTAAGAAGTGGCAGTTTAATCACCTGTGAAAGGGCACTGGAAGAAGGA
AGAGATATCTTTGCCATCCCTGGAAATATTGCAGATGGAAAATCTGATGGCTGTAATCATCTTATTCAACAAGGAGCAAA
ACTTGTCTATCAAGCTCAAGATATTTTAGAAGAATATTTGTACAATTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (69-270)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	97.872	100	0.979
dprA	Streptococcus mutans UA159	59.353	98.582	0.585
dprA/cilB/dalA	Streptococcus mitis SK321	56.071	99.291	0.557
dprA/cilB/dalA	Streptococcus pneumoniae R6	55.714	99.291	0.553
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	55.714	99.291	0.553
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	55.714	99.291	0.553
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	55.714	99.291	0.553
dprA/cilB/dalA	Streptococcus pneumoniae D39	55.714	99.291	0.553
dprA	Vibrio campbellii strain DS40M4	35.644	100	0.383
dprA	Bacillus subtilis subsp. subtilis str. 168	39.273	97.518	0.383
dprA	Legionella pneumophila strain ERS1305867	39.13	97.872	0.383
dprA	Haemophilus influenzae Rd KW20	39.63	95.745	0.379